ZFIN Lab: Matthias Carl Lab

ZFIN ID: ZDB-LAB-191010-2

Matthias Carl Lab

PI/Director:	Carl, Matthias
Contact Person:	Carl, Matthias
Email:	matthias.carl@unitn.it
URL:	http://www.cibio.unitn.it/744/laboratory-of-translational-neurogenetics
Address:	Laboratory of Translational Neurogenetics Department of Cellular, Computational and Integrative Biology, CIBIO University of Trento Via Sommarive 9 38123 Trento-Povo
Country:	Italy
Phone:	(0039) 0461 283931
Fax:	(0039) 0461 283937
Line Designation:	None assigned

GENOMIC FEATURES ORIGINATING FROM THIS LAB No data available

STATEMENT OF RESEARCH INTERESTS

LAB MEMBERS

Bühler, Anja Post-Doc

ZEBRAFISH PUBLICATIONS OF LAB MEMBERS

Agostini, C., Bühler, A., Antico Calderone, A., Aadepu, N., Herder, C., Loosli, F., Carl, M. (2022) Conserved and diverged asymmetric gene expression in the brain of teleosts. Frontiers in cell and developmental biology. 10:1005776

Bühler, A., Gahr, B.M., Park, D.D., Bertozzi, A., Boos, A., Dalvoy, M., Pott, A., Oswald, F., Kovall, R.A., Kühn, B., Weidinger, G., Rottbauer, W., Just, S. (2021) Histone deacetylase 1 controls cardiomyocyte proliferation during embryonic heart development and cardiac regeneration in zebrafish. PLoS Genetics. 17:e1009890

Bühler, A., Carl, M. (2021) Zebrafish Tools for Deciphering Habenular Network-Linked Mental Disorders. Biomolecules. 11(2):

Albadri, S., Armant, O., Aljand-Geschwill, T., Del Bene, F., Carl, M., Strähle, U., Poggi, L. (2020) Expression of a Barhl1a reporter in subsets of retinal ganglion cells and commissural neurons of the developing zebrafish brain. Scientific Reports. 10:8814

Guglielmi, L., Bühler, A., Moro, E., Argenton, F., Poggi, L., Carl, M. (2020) Temporal control of Wnt signaling is required for habenular neuron diversity and brain asymmetry. Development (Cambridge, England). 147(6):

Imle, R., Wang, B.T., Stützenberger, N., Birkenhagen, J., Tandon, A., Carl, M., Himmelreich, N., Thiel, C., Gröne, H.J., Poschet, G., Völkers, M., Gülow, K., Schröder, A., Carillo, S., Mittermayr, S., Bones, J., Kamiński, M.M., Kölker, S., Sauer, S.W. (2019) ADP-dependent glucokinase regulates energy metabolism via ER-localized glucose sensing. Scientific Reports. 9:14248

Breuer, M., Guglielmi, L., Zielonka, M., Hemberger, V., Kölker, S., Okun, J.G., Hoffmann, G.F., Carl, M., Sauer, S.W., Opladen, T. (2019) QDPR homologues in Danio rerio regulate melanin synthesis, early gliogenesis, and glutamine homeostasis. PLoS One. 14:e0215162

Zielonka, M., Probst, J., Carl, M., Hoffmann, G.F., Kölker, S., Okun, J.G. (2019) Bioenergetic dysfunction in a zebrafish model of acute hyperammonemic decompensation. Experimental neurology. 314:91-99

Poggi, L., Casarosa, S., Carl, M. (2018) An Eye on the Wnt Inhibitory Factor Wif1. Frontiers in cell and developmental biology. 6:167

Roussigné, M., Wei, L., Tsingos, E., Kuchling, F., Alkobtawi, M., Tsalavouta, M., Wittbrodt, J., Carl, M., Blader, P., Wilson, S.W. (2018) Left/right asymmetric collective migration of parapineal cells is mediated by focal FGF signaling activity in leading cells. Proceedings of the National Academy of Sciences of the United States of America. 115(42):E9812-E9821

Zielonka, M., Breuer, M., Okun, J.G., Carl, M., Hoffmann, G.F., Kölker, S. (2018) Pharmacologic rescue of hyperammonemia-induced toxicity in zebrafish by inhibition of ornithine aminotransferase. PLoS One. 13:e0203707

Dimitrov, B., Himmelreich, N., Hipgrave Ederveen, AL., Lüchtenborg, C., Okun, J.G., Breuer, M., Hutter, A.M., Carl, M., Guglielmi, L., Hellwig, A., Thiemann, K.C., Jost, M., Peters, V., Staufner, C., Hoffmann, G.F., Hackenberg, A., Paramasivam, N., Wiemann, S., Eils, R., Schlesner, M., Strahl, S., Brügger, B., Wuhrer, M., Christoph Korenke, G., and Thiel, C. (2018) Cutis laxa, exocrine pancreatic insufficiency and altered cellular metabolism as additional symptoms in a new patient with ATP6AP1-CDG. Molecular genetics and metabolism. 123(3):364-374

Choi, J.H., Jeong, Y.M., Kim, S., Lee, B., Ariyasiri, K., Kim, H.T., Jung, S.H., Hwang, K.S., Choi, T.I., Park, C.O., Huh, W.K., Carl, M., Rosenfeld, J.A., Raskin, S., Ma, A., Gecz, J., Kim, H.G., Kim, J.S., Shin, H.C., Park, D.S., Gerlai, R., Jamieson, B.B., Kim, J.S., Iremonger, K.J., Lee, S.H., Shin, H.S., Kim, C.H. (2018) Targeted knockout of a chemokine-like gene increases anxiety and fear responses. Proceedings of the National Academy of Sciences of the United States of America. 115(5):E1041-E1050

Beretta, C.A., Dross, N., Guglielmi, L., Bankhead, P., Soulika, M., Gutierrez-Triana, J.A., Paolini, A., Poggi, L., Falk, J., Ryu, S., Kapsimali, M., Engel, U., Carl, M. (2017) Early Commissural Diencephalic Neurons Control Habenular Axon Extension and Targeting. Current biology : CB. 27(2):270–278

Cepero Malo, M., Duchemin, A.L., Guglielmi, L., Patzel, E., Sel, S., Auffarth, G.U., Carl, M., Poggi, L. (2017) The Zebrafish Anillin-eGFP Reporter Marks Late Dividing Retinal Precursors and Stem Cells Entering Neuronal Lineages. PLoS One. 12:e0170356

Just, S., Raphel, L., Berger, I.M., Bühler, A., Keßler, M., Rottbauer, W. (2016) Tbx20 Is an Essential Regulator of Embryonic Heart Growth in Zebrafish. PLoS One. 11:e0167306

Kopajtich, R., Murayama, K., Janecke, A.R., Haack, T.B., Breuer, M., Knisely, A.S., Harting, I., Ohashi, T., Okazaki, Y., Watanabe, D., Tokuzawa, Y., Kotzaeridou, U., Kölker, S., Sauer, S., Carl, M., Straub, S., Entenmann, A., Gizewski, E., Feichtinger, R.G., Mayr, J.A., Lackner, K., Strom, T.M., Meitinger, T., Müller, T., Ohtake, A., Hoffmann, G.F., Prokisch, H., Staufner, C. (2016) Biallelic IARS Mutations Cause Growth Retardation with Prenatal Onset, Intellectual Disability, Muscular Hypotonia, and Infantile Hepatopathy. American journal of human genetics. 99(2):414-22

Hirth, S., Bühler, A., Bührdel, J.B., Rudeck, S., Dahme, T., Rottbauer, W., Just, S. (2016) Paxillin and Focal Adhesion Kinase (FAK) Regulate Cardiac Contractility in the Zebrafish Heart. PLoS One. 11:e0150323

Beretta, C.A., Dross, N., Engel, U., Carl, M. (2016) Tracking Cells in GFP-transgenic Zebrafish Using the Photoconvertible PSmOrange System. Journal of visualized experiments : JoVE. (108):e53604

Bühler, A., Kustermann, M., Bummer, T., Rottbauer, W., Sandri, M., Just, S. (2016) Atrogin-1 Deficiency Leads to Myopathy and Heart Failure in Zebrafish. International Journal of Molecular Sciences. 17(2)

Hüsken, U., Stickney, H.L., Gestri, G., Bianco, I.H., Faro, A., Young, R.M., Roussigne, M., Hawkins, T.A., Beretta, C.A., Brinkmann, I., Paolini, A., Jacinto, R., Albadri, S., Dreosti, E., Tsalavouta, M., Schwarz, Q., Cavodeassi, F., Barth, A.K., Wen, L., Zhang, B., Blader, P., Yaksi, E., Poggi, L., Zigman, M., Lin, S., Wilson, S.W., Carl, M. (2014) Tcf7l2 Is Required for Left-Right Asymmetric Differentiation of Habenular Neurons. Current biology : CB. 24(19):2217-27

Dreosti, E., Vendrell Llopis, N., Carl, M., Yaksi, E., and Wilson, S.W. (2014) Left-right asymmetry is required for the habenulae to respond to both visual and olfactory stimuli. Current biology : CB. 24(4):440-445

Mwafi, N., Beretta, C.A., Paolini, A., and Carl, M. (2014) Divergent Wnt8a gene expression in teleosts. PLoS One. 9(1):e85303

Demir, K., Kirsch, N., Beretta, C.A., Erdmann, G., Ingelfinger, D., Moro, E., Argenton, F., Carl, M., Niehrs, C., and Boutros, M. (2013) RAB8B is required for activity and caveolar endocytosis of LRP6. Cell Reports. 4(6):1224-1234

Beretta, C.A., Dross, N., Bankhead, P., and Carl, M. (2013) The ventral habenulae of zebrafish develop in prosomere 2 dependent on Tcf7l2 function. Neural Development. 8(1):19

Hüsken, U., and Carl, M. (2013) The Wnt/beta-catenin signaling pathway establishes neuroanatomical asymmetries and their laterality. Mechanisms of Development. 130(6-8):330-5

McNabb, A., Scott, K., Ochsenstein, E.V., Seufert, K., and Carl, M. (2012) Don't be afraid to set up your fish facility. Zebrafish. 9(3):120-125

Beretta, C.A., Dross, N., Guiterrez-Triana, J.A., Ryu, S., and Carl, M. (2012) Habenula circuit development: past, present, and future. Frontiers in Neurogenesis. 6:51

Berns, N., Woichansky, I., Kraft, N., Hüsken, U., Carl, M., and Riechmann, V. (2012) "Vacuum-assisted staining": a simple and efficient method for screening in Drosophila. Development genes and evolution. 222(2):113-118

Beretta, C.A., Brinkmann, I., and Carl, M. (2011) All four zebrafish Wnt7 genes are expressed during early brain development. Gene expression patterns : GEP. 11(3-4):277-84

Wilkinson, C.J., Carl, M., and Harris, W.A. (2009) Cep70 and Cep131 contribute to ciliogenesis in zebrafish embryos. BMC Cell Biology. 10:17

Bianco, I.H., Carl, M., Russell, C., Clarke, J.D., and Wilson, S.W. (2008) Brain asymmetry is encoded at the level of axon terminal morphology. Neural Development. 3:9

Carl, M., Bianco, I.H., Bajoghli, B., Aghaallaei, N., Czerny, T., and Wilson, S.W. (2007) Wnt/Axin1/beta-Catenin Signaling Regulates Asymmetric Nodal Activation, Elaboration, and Concordance of CNS Asymmetries. Neuron. 55(3):393-405

Yokoi, H., Shimada, A., Carl, M., Takashima, S., Kobayashi, D., Narita, T., Jindo, T., Kimura, T., Kitagawa, T., Kage, T., Sawada, A., Naruse, K., Asakawa, S., Shimizu, N., Mitani, H., Shima, A., Tsutsumi, M., Hori, H., Wittbrodt, J., Saga, Y., Ishikawa, Y., Araki, K., and Takeda, H. (2007) Mutant analyses reveal different functions of fgfr1 in medaka and zebrafish despite conserved ligand-receptor relationships. Developmental Biology. 304(1):326-337

Gestri, G., Carl, M., Appolloni, I., Wilson, S.W., Barsacchi, G., and Andreazzoli, M. (2005) Six3 functions in anterior neural plate specification by promoting cell proliferation and inhibiting Bmp4 expression. Development (Cambridge, England). 132(10):2401-2413