OBO ID: SO:0001578

Term Name:	stop_lost		Search Ontology:
Synonyms:	ANNOVAR:stoploss Jannovar:stop_lost Seattleseq:stop-lost Seattleseq:stop-lost-near-splice snpEff:STOP_LOST stop codon lost stop lost VAAST:stop_lost VAT:removedStop VEP:stop_lost
Definition:	A sequence variant where at least one base of the terminator codon (stop) is changed, resulting in an elongated transcript.
References:	http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp http://snpeff.sourceforge.net/SnpEff_manual.html http://vat.gersteinlab.org/formats.php http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences
Ontology:	Sequence Ontology