ZFIN ID: ZDB-GENE-030616-132
Gene Name: MYC binding protein 2
Gene Symbol: mycbp2

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Previous Names: esr, esrom (2), fa97c06, ns:zft368, PAM (1), si:busm1-12g7.1, si:dz12g7.1, si:dz256p4.1, til, tilsit, wu:fa97c06, xx:zft368, zft368

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Adult (90d-730d, breeding adult)
  brain, eye, gill, heart (all 11) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016495Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016496Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • mycbp2_unspecified Unspecified Unknown Unknown
    sa17311 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21455 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25421 Point Mutation Unknown Premature Stop ENU
    sa27372 Point Mutation Unknown Splice Site ENU
    sa34597 Point Mutation Unknown Premature Stop ENU
    sa41386 Point Mutation Unknown Premature Stop ENU
    tb241a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te250 Small Deletion Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te275 Insertion Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • te279 Unknown Unknown Unknown ENU
    te376 Unknown Unknown Unknown ENU
    tf4z Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tg5 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tg06a Unknown Unknown Unknown ENU
    tg265a Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • th36b Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • th222 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tj236 Unknown Unknown Unknown ENU
    tn207b Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tp203 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • tq213c Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ts208 Unknown Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • ty130b Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-mycbp2 (1), MO2-mycbp2 (1)
    PHENOTYPE
    Data: 25 figures from 6 publications
    Observed in: developmental pigmentation, eye ipsilateral side, habenular commissure, nervous system (all 12) expand
    DISEASE ASSOCIATED WITH mycbp2 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon choice point recognition (more)
    Cellular Component cytoplasm (more)
    Molecular Function ubiquitin-protein transferase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000408 (1)
  • InterPro:IPR001841 (1)
  • InterPro:IPR003646 (1)
  • InterPro:IPR004939 (1)
  • InterPro:IPR008979 (1)
  • InterPro:IPR009091 (1)
  • InterPro:IPR012983 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR017868 (1)
  • PROSITE:PS00626 (1)
  • PROSITE:PS50012 (1)
  • PROSITE:PS50089 (1)
  • PROSITE:PS50194 (1)
  • PROSITE:PS51284 (1)
  • Pfam:PF00415 (1)
  • Pfam:PF00630 (1)
  • Pfam:PF08005 (1)
  • Pfam:PF08239 (1)
  • Pfam:PF13639 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mycbp2-001 (1) 15337
    ottdart00000001875 (1) 2743
    ottdart00000001995 (1) 9225
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mycbp2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    mycbp2Contained in: [BAC] CH211-4P8 (1) (order this), CH211-221B16 (1) (order this), CH211-279B21 (1) (order this), DKEY-250A21 (1) (order this)
    [PAC] BUSM1-12G7 (1) (order this), BUSM1-256P4 (order this)
    mycbp2Encodes: [EST] fa97c06, zft368
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001012247 (1) 15334bp
    Genomic GenBank:AL954845 (1) 226343bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QI76 (1) 4736aa
    Sequence Clusters UniGene:146702 (1)
    Sequence Information (all 69)
    OTHER mycbp2 GENE PAGES
  • Gene:368439 (1)
  • VEGA:OTTDARG00000001756 (1)
  • VEGA:OTTDARG00000001868 (1)
  • VEGA:OTTDARG00000030613 (1)
  • Ensembl(GRCz10):ENSDARG00000001220 (1)
  • ORTHOLOGY for mycbp2 (Chr: 9)
    Species Symbol Chromosome Accession # Evidence
    Human MYCBP2 13
  • Gene:23077
  • OMIM:610392
  • HGNC:23386
  • Amino acid sequence comparison (4)
    Conserved genome location (synteny) (1)
    Mouse Mycbp2 14
  • MGI:2179432
  • Gene:105689
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (32)