ZFIN Sequences for Gene: depdc1a

ZFIN ID: ZDB-GENE-030131-9827

ZFIN ID: ZDB-GENE-030131-9827

SEQUENCE INFORMATION

Gene Name:	DEP domain containing 1a
Gene Symbol:	depdc1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_198872 (1)	2957 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166773 (1)	2551 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01008518 (1)	3445 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC044382 (1)	2957 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC171596 (1)	2636 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC171624 (1)	2627 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI326785 (1)	717 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI326786 (1)	574 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI626632 (1)	489 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI629378 (1)	407 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR759968 (1)	182233 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL954819 (1)	177929 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT025702 (1)	162907 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:Q803Q4 (1)	800 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A2R8QHF9 (1)	518 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_942573 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166830 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH44382 (1)	800 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI71596 (1)	800 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI71624 (1)	800 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:Q803Q4 (1)	800 aa	Select Tool ZFIN BLAST NCBI BLAST

depdc1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-198N5 (1)	Genomic	GenBank:CR759968	182233	Select Tool MegaBLAST Ensembl

depdc1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:55374 (1)	RNA	GenBank:BC044382	2957	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:198323 (2)	RNA	GenBank:BC171596	2636	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI71596	800	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:198351 (2)	RNA	GenBank:BC171624	2627	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI71624	800	Select Tool ZFIN BLAST NCBI BLAST
[EST] cb41 (1)	RNA	GenBank:BI326785	717	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BI326786	574	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fc05g03 (2)	RNA	GenBank:AI626632	489	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI629378	407	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT