ZFIN Sequences for Gene: pcdh19

ZFIN ID: ZDB-GENE-030131-4218

ZFIN ID: ZDB-GENE-030131-4218

SEQUENCE INFORMATION

Gene Name:	protocadherin 19
Gene Symbol:	pcdh19

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001127519 (1)	6322 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009291120 (1)	6390 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009291121 (1)	6178 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005169595 (1)	6159 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC129243 (1)	5281 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:FJ855218 (1)	3267 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:FJ855219 (1)	3054 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01062571 (1)	1854 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH581688 (1)	907 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CF543950 (1)	586 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI943041 (1)	541 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX511013 (1)	161346 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU151882 (1)	128581 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR318607 (2)	111412 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP102785 (2)	31544 nt	Select Tool MegaBLAST Ensembl
	GenBank:AB362379 (1)	2689 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:AB362378 (1)	2476 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A2R8QME5 (1)	1094 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M1NJM2 (1)	1088 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A9U5BCE3 (1)	1088 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F8W3X3 (1)	1088 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A9K3Y6L2 (1)	1083 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A1L1W7 (1)	1078 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AP82 (1)	1023 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001120991 (1)	1088 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005169652 (1)	1017 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009289395 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009289396 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:F8W3X3 (1)	1088 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:ACQ72596 (1)	1083 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI29244 (1)	1078 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:ACQ72597 (1)	1012 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:BAG15887 (1)	800 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:BAG15886 (1)	729 aa	Select Tool ZFIN BLAST NCBI BLAST

pcdh19 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-237H22 (1)	Genomic	GenBank:CR318607	111412	Select Tool MegaBLAST Ensembl
[FOSMID] CH1073-359P3 (1)	Genomic	GenBank:FP102785	31544	Select Tool MegaBLAST Ensembl

pcdh19 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] fc83e05 (2)	RNA	GenBank:AI943041	541	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT