ZFIN Sequences for Gene: vps52

ZFIN ID: ZDB-GENE-010430-2

ZFIN ID: ZDB-GENE-010430-2

SEQUENCE INFORMATION

Gene Name:	VPS52 subunit of GARP complex
Gene Symbol:	vps52

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_009294179 (1)	3325 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021468305 (1)	2998 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_002456167 (1)	1897 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01043124 (1)	4370 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EG584678 (1)	915 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CN320130 (1)	898 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EG586543 (1)	854 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DV590670 (1)	798 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM141619 (1)	766 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK686009 (1)	600 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI545157 (1)	560 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BQ076621 (1)	555 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI350832 (1)	550 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CR927408 (1)	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI545388 (1)	526 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI563138 (1)	517 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM023864 (1)	517 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI585099 (1)	496 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI584479 (1)	436 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AA494847 (1)	403 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX957299 (1)	168017 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP085400 (1)	110818 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A0R4IY52 (1)	724 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSC6 (1)	615 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:XP_009292454 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021323980 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:CAM56558 (1)	721 aa	Select Tool ZFIN BLAST NCBI BLAST

vps52 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-389O5 (1)	Genomic	GenBank:FP085400	110818	Select Tool MegaBLAST Ensembl
[BAC] DKEY-179E8 (1)	Genomic	GenBank:BX957299	168017	Select Tool MegaBLAST Ensembl

vps52 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] fb94c11 (2)	RNA	GenBank:AI585099	496	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI584479	436	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:7148658 (1)	RNA	GenBank:CK686009	600	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT