ZFIN Sequences for Gene: ctsd

ZFIN ID: ZDB-GENE-010131-8

ZFIN ID: ZDB-GENE-010131-8

SEQUENCE INFORMATION

Gene Name:	cathepsin D
Gene Symbol:	ctsd

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_131710 (1)	2418 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01001615 (1)	1804 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AJ278268 (1)	1708 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC042316 (1)	1704 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC154315 (1)	1649 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC062824 (1)	1646 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AY050516 (1)	1610 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC164814 (1)	1264 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH444870 (1)	968 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH584703 (1)	964 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH470745 (1)	817 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI584968 (1)	604 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI584431 (1)	570 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW184645 (1)	287 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR318631 (1)	189711 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX649507 (1)	166185 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX000347 (1)	155713 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:Q8AWD9 (1)	398 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_571785 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:CAC20111 (1)	399 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH42316 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH62824 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI54316 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI64814 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAL61540 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK05390 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK11131 (1)	398 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK05389 (1)	139 aa	Select Tool ZFIN BLAST NCBI BLAST

ctsd CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-154H20 (1)	Genomic	GenBank:BX649507	166185	Select Tool MegaBLAST Ensembl

ctsd ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:55226 (2)	RNA	GenBank:BC042316	1704	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:77573 (1)	RNA	GenBank:BC062824	1646	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:174473 (1)	RNA	GenBank:BC154315	1649	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:191989 (1)	RNA	GenBank:BC164814	1264	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI64814	398	Select Tool ZFIN BLAST NCBI BLAST
[EST] fb93e11 (1)	RNA	GenBank:AI584968	604	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI584431	570	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fj17b09 (2)	RNA	GenBank:AW184645	287	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT