ZFIN Sequences for Gene: hoxa1a

ZFIN ID: ZDB-GENE-000823-5

ZFIN ID: ZDB-GENE-000823-5

SEQUENCE INFORMATION

Gene Name:	homeobox A1a
Gene Symbol:	hoxa1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_131536 (1)	1108 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017352263 (1)	5400 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01026107 (1)	3119 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC162701 (1)	1108 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AJ306430 (1)	990 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AJ306431 (1)	885 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BG985793 (1)	321 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DQ060531 (1)	268 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR382300 (1)	202006 nt	Blast at MegaBLAST
	GenBank:AC107365 (1)	128411 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL645756 (2)	88712 nt	Select Tool MegaBLAST Ensembl
	GenBank:AF071243	1301 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:DU644665 (1)	376 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:B3DHB1 (1)	329 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q98SI1 (1)	329 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_571611 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017207752 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI62701 (1)	329 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAC34565 (1)	329 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAD52136 (1)	329 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:Q98SI1 (1)	329 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAD15937 (1)	315 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAC34566 (1)	294 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAD52137 (1)	294 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK10853 (1)	294 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAY67909 (1)	89 aa	Select Tool ZFIN BLAST NCBI BLAST

hoxa1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] DKEY-25E11 (1)	Genomic	GenBank:CR382300	202006	Blast at MegaBLAST
[PAC] BUSM1-227P06 (1)	Genomic	GenBank:AL645756	88712	Select Tool MegaBLAST Ensembl

hoxa1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:194117 (1)	RNA	GenBank:BC162701	1108	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] eu257 (1)	Genomic	GenBank:DU644665	376	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[EST] ibd3526 (1)	RNA	GenBank:BG985793	321	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT