ZFIN Sequences for Gene: CH1073-250A3

ZFIN ID: ZDB-FOSMID-090114-337

ZFIN ID: ZDB-FOSMID-090114-337

SEQUENCE INFORMATION

Fosmid Name:	CH1073-250A3

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001423772 (1)	2670 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001003519 (1)	1855 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_683128 (1)	5657 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005168776 (1)	1895 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01029675 (1)	4283 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01042709 (1)	2155 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC077135 (1)	1855 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01020459 (1)	1615 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC092722 (1)	947 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CT668625 (1)	827 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CN172630 (1)	777 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB930835 (1)	638 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:FP340256 (1)	41319 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU638700	37764 nt	Select Tool MegaBLAST Ensembl
	GenBank:CABZ01085327 (1)	5639 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01085328 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A0R4IKJ1 (1)	721 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q6DEI0 (1)	486 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001003519 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001410701 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005168833 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_688220 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH77135 (1)	486 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH92722 (1)	287 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:A0A0R4IKJ1 (1)		Select Tool ZFIN BLAST NCBI BLAST

CH1073-250A3 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] pcif1 (7)	RNA	RefSeq:XM_683128	5657	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001423772	2670	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01029675	4283	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01042709	2155	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC092722	947	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CT668625	827	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CN172630	777	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EB930835	638	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU638700	37764	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CABZ01085328		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
	Genomic	GenBank:CABZ01085327	5639	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	Polypeptide	UniProtKB:A0A0R4IKJ1	721	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_688220		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001410701		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH92722	287	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:A0A0R4IKJ1		Select Tool ZFIN BLAST NCBI BLAST
[GENE] pltp (7)	RNA	RefSeq:XM_005168776	1895	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001003519	1855	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC077135	1855	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01020459	1615	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:FP340256	41319	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU638700	37764	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q6DEI0	486	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005168833		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001003519		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH77135	486	Select Tool ZFIN BLAST NCBI BLAST