ZFIN Sequences for Gene: CH1073-103H6

ZFIN ID: ZDB-FOSMID-071002-8

ZFIN ID: ZDB-FOSMID-071002-8

SEQUENCE INFORMATION

Fosmid Name:	CH1073-103H6

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001313750 (1)	3629 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001034980 (1)	1360 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009306788 (1)	3663 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005156335 (1)	3652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017358471 (1)	3642 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_002457347 (1)	3147 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_002457346 (1)	3136 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01043209 (1)	3760 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC099994 (1)	1360 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	RefSeq:NW_018394852 (1)	265246 nt	Blast at MegaBLAST
	GenBank:CR456684 (1)	262809 nt	Blast at MegaBLAST
	GenBank:AL935160 (1)	140401 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459185 (1)	132093 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459116	38558 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459010 (2)	15282 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A2R8Q5I2 (1)	224 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1Q7S0 (1)	217 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3BE99 (1)	194 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6Z1C2 (1)	187 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001300679 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005156392 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009305063 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017213960 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH99994 (1)	191 aa	Select Tool ZFIN BLAST NCBI BLAST

CH1073-103H6 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] vti1a (11)	RNA	RefSeq:XM_009306788	3663	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005156335	3652	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_017358471	3642	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001313750	3629	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XR_002457347	3147	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XR_002457346	3136	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001034980	1360	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01043209	3760	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC099994	1360	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	RefSeq:NW_018394852	265246	Blast at MegaBLAST
	Genomic	GenBank:CR456684	262809	Blast at MegaBLAST
	Genomic	GenBank:AL935160	140401	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU459185	132093	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU459116	38558	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CU459010	15282	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	Polypeptide	UniProtKB:A0A2R8Q5I2	224	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:F1Q7S0	217	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M3BE99	194	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M6Z1C2	187	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_017213960		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_009305063		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005156392		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001300679		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH99994	191	Select Tool ZFIN BLAST NCBI BLAST