ZFIN Sequences for Gene: CH211-260O22

ZFIN ID: ZDB-BAC-060503-868

ZFIN ID: ZDB-BAC-060503-868

SEQUENCE INFORMATION

BAC Name:	CH211-260O22

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001044332 (1)	2091 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001201561 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_677936 (1)	1440 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_677843 (1)	1292 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005170197 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:GDQQ01011035 (1)	2328 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC151860 (1)	2126 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC129405 (1)	1120 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC122172 (1)	920 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CO936960 (1)	852 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CO926201 (1)	841 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI722540 (1)	608 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB895997 (1)	599 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL912616 (1)	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CR929407 (1)	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CR929553 (1)	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI722126 (1)	512 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW174898 (1)	457 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW154598 (1)	421 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL917846 (1)	370 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01003729 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:GFIL01022754 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:GFIL01038524 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:AL845301 (1)	171078 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU138502 (1)	158947 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR926459	132837 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX897690 (1)	128296 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT027574 (1)	89891 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:F1QW15 (1)	781 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8N7UUW5 (1)	734 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q1L8B4 (1)	529 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1Q4Z9 (1)	388 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M1P2H4 (1)	57 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001037797 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001188490 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_682935 (1)	362 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005170254 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_683028 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI51861 (1)	529 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK04829 (1)	529 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAI11549 (1)	285 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK04827 (1)	169 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK04830 (1)	143 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK04826 (1)	55 aa	Select Tool ZFIN BLAST NCBI BLAST

CH211-260O22 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] cep85l (7)	RNA	RefSeq:XM_677936	1440	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005170197		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01003729		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:CR929553	539	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AL917846	370	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:AL845301	171078	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR926459	132837	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:F1QW15	781	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8N7UUW5	734	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_683028		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005170254		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAI11549	285	Select Tool ZFIN BLAST NCBI BLAST
[GENE] pln1 (14)	RNA	RefSeq:NM_001201561		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01022754		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:BC129405	1120	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC122172	920	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CO936960	852	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:CO926201	841	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:EB895997	599	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:AL845301	171078	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR926459	132837	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0A8M1P2H4	57	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001188490		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAK04827	169	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:CAK04826	55	Select Tool ZFIN BLAST NCBI BLAST
[GENE] slc35f1 (5)	RNA	RefSeq:XM_677843	1292	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01038524		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	GenBank:CR929407	539	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AL912616	539	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CU138502	158947	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR926459	132837	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:BX897690	128296	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CT027574	89891	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:F1Q4Z9	388	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_682935	362	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAK04830	143	Select Tool ZFIN BLAST NCBI BLAST
[GENE] si:dkeyp-114g9.1 (5)	RNA	RefSeq:NM_001044332	2091	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01011035	2328	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC151860	2126	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI722540	608	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI722126	512	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW174898	457	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW154598	421	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:CR926459	132837	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q1L8B4	529	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001037797		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAK04829	529	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI51861	529	Select Tool ZFIN BLAST NCBI BLAST