ZFIN Sequences for Gene: RP71-1C22

ZFIN ID: ZDB-BAC-060503-849

ZFIN ID: ZDB-BAC-060503-849

SEQUENCE INFORMATION

BAC Name:	RP71-1C22

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001002066 (1)	1436 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_194420 (1)	915 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC155266 (1)	1506 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC071386 (1)	1436 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC162925 (1)	1014 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC162926 (1)	1014 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AF462040 (1)	915 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL645822	181112 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX255947 (1)	147891 nt	Select Tool MegaBLAST Ensembl
	GenBank:AF512548 (1)	4309 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:Q6IQL9 (1)	377 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q8JFD6 (1)	304 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001002066 (1)	377 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_919401 (1)	304 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH71386 (1)	377 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI55267 (1)	377 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAQ14918 (1)	377 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI62925 (1)	304 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI62926 (1)	304 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAM46766 (1)	304 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAM47277 (1)	304 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAQ14917 (1)	304 aa	Select Tool ZFIN BLAST NCBI BLAST

RP71-1C22 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] actc2 (9)	RNA	RefSeq:NM_001002066	1436	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC155266	1506	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC071386	1436	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:AL645822	181112	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:BX255947	147891	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q6IQL9	377	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001002066	377	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAQ14918	377	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI55267	377	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH71386	377	Select Tool ZFIN BLAST NCBI BLAST
[GENE] gjd2b (29)	RNA	RefSeq:NM_194420	915	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC162926	1014	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC162925	1014	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AF462040	915	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:AL645822	181112	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:BX255947	147891	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:AF512548	4309	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	Polypeptide	UniProtKB:Q8JFD6	304	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_919401	304	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:CAQ14917	304	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAM47277	304	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAM46766	304	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI62926	304	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI62925	304	Select Tool ZFIN BLAST NCBI BLAST