| ZFIN ID: ZDB-BAC-060503-1814 |
| SEQUENCE INFORMATION |
| BAC Name: | RP71-68N21 |
|---|
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001423734 (1) | 7103 nt |
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| RefSeq:NM_001123307 (1) | 6980 nt |
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| RefSeq:NM_001128256 (1) | 6794 nt |
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| RefSeq:NM_207056 (1) | 3392 nt |
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| RefSeq:NM_001020800 (1) | 2661 nt |
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| RefSeq:NM_001114450 (1) | 2508 nt |
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| RefSeq:NM_200483 (1) | 1808 nt |
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| RefSeq:NM_001202437 (1) | 1790 nt |
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| RefSeq:NM_200720 (1) | 916 nt |
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| RefSeq:NM_001004652 (1) | 542 nt |
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| RefSeq:NM_001386297 (1) |
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| RefSeq:XM_021478741 (1) | 7289 nt |
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| RefSeq:XM_005167579 (1) | 7273 nt |
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| RefSeq:XM_005167544 (1) | 1869 nt |
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| RefSeq:XM_005167545 (1) | 1808 nt |
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| RefSeq:XM_005167590 (1) | 1765 nt |
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| RefSeq:XM_001923378 (1) |
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| RefSeq:XM_009304664 (1) |
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| RefSeq:XM_021472154 (1) |
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| RefSeq:XM_021472155 (1) |
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| RefSeq:XM_021472158 (1) |
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| RefSeq:XM_021478892 (1) |
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| RefSeq:XM_021478893 (1) |
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| RefSeq:XM_021478894 (1) |
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| RefSeq:XM_021478895 (1) |
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| RefSeq:XM_689112 (1) |
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| GenBank:GDQH01004461 (1) | 7002 nt |
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| GenBank:GFIL01030493 (1) | 3955 nt |
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| GenBank:EF524200 (1) | 3670 nt |
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| GenBank:EF524199 (1) | 3484 nt |
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| GenBank:BC066406 (1) | 3392 nt |
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| GenBank:GDQH01009273 (1) | 3144 nt |
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| GenBank:BC155819 (1) | 2675 nt |
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| GenBank:AY293119 (1) | 2661 nt |
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| GenBank:BC129264 (1) | 2660 nt |
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| GenBank:BC155228 (1) | 2508 nt |
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| GenBank:GFIL01038129 (1) | 2339 nt |
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| GenBank:BC055205 (1) | 1809 nt |
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| GenBank:GFIL01012291 (1) | 1774 nt |
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| GenBank:BC090729 (1) | 1745 nt |
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| GenBank:BC091849 (1) | 1589 nt |
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| GenBank:BC074074 (1) | 1550 nt |
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| GenBank:BC164200 (1) | 1180 nt |
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| GenBank:EH501612 (1) | 994 nt |
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| GenBank:EH538581 (1) | 930 nt |
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| GenBank:EH578587 (1) | 906 nt |
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| GenBank:EH478847 (1) | 882 nt |
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| GenBank:EH595954 (1) | 882 nt |
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| GenBank:BC155197 (1) | 872 nt |
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| GenBank:BC059482 (1) | 855 nt |
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| GenBank:EH440312 (1) | 830 nt |
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| GenBank:DR721840 (1) | 750 nt |
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| GenBank:DR729106 (1) | 715 nt |
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| GenBank:CD597771 (1) | 650 nt |
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| GenBank:BI709589 (1) | 619 nt |
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| GenBank:EH490144 (1) | 573 nt |
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| GenBank:GFIL01006899 (1) | 565 nt |
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| GenBank:EB974499 (1) | 552 nt |
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| GenBank:EH495356 (1) | 544 nt |
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| GenBank:BC081527 (1) | 519 nt |
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| GenBank:GFIL01034420 (1) | 459 nt |
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| GenBank:CD603519 (1) | 445 nt |
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| GenBank:EB984405 (1) | 421 nt |
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| GenBank:CD600912 (1) | 347 nt |
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| GenBank:BC164430 (1) | 274 nt |
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| GenBank:GDQH01017796 (1) |
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| Genomic | GenBank:CU151884 (1) | 200118 nt | Blast at MegaBLAST |
| GenBank:CT027983 (1) | 185833 nt | ||
| GenBank:BX511129 | 152922 nt | ||
| GenBank:BX936339 (2) | 38616 nt | ||
| GenBank:HB890758 (1) | 1809 nt |
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| GenBank:HC948167 (1) | 1809 nt |
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| Polypeptide | UniProtKB:B0S8I4 (1) | 1140 aa |
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| UniProtKB:B2BJC1 (1) | 1140 aa |
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| UniProtKB:B2BJC0 (1) | 1078 aa |
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| UniProtKB:E9QHV0 (1) | 686 aa |
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| UniProtKB:A0A8M9QB93 (1) | 684 aa |
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| UniProtKB:A0A8M1P1R9 (1) | 495 aa |
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| UniProtKB:Q58EL7 (1) | 495 aa |
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| UniProtKB:Q6NYZ4 (1) | 456 aa |
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| UniProtKB:A0A8M2BF11 (1) | 378 aa |
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| UniProtKB:F1QSA2 (1) | 374 aa |
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| UniProtKB:Q6JWV8 (1) | 370 aa |
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| UniProtKB:A9JT76 (1) | 367 aa |
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| UniProtKB:F1QCD8 (1) | 357 aa |
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| UniProtKB:Q7SXX8 (1) | 357 aa |
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| UniProtKB:A0A8M9PLD3 (1) | 311 aa |
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| UniProtKB:Q6PC41 (1) | 153 aa |
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| UniProtKB:Q66I53 (1) | 68 aa |
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| RefSeq:NP_956777 (1) | 357 aa |
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| RefSeq:NP_001004652 (1) |
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| RefSeq:NP_001018636 (1) |
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| RefSeq:NP_001107922 (1) |
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| RefSeq:NP_001116779 (1) |
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| RefSeq:NP_001121728 (1) |
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| RefSeq:NP_001189366 (1) |
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| RefSeq:NP_001373226 (1) |
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| RefSeq:NP_001410663 (1) |
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| RefSeq:NP_957014 (1) |
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| RefSeq:NP_996939 (1) |
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| RefSeq:XP_001923413 (1) | 684 aa |
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| RefSeq:XP_005167601 (1) |
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| RefSeq:XP_005167602 (1) |
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| RefSeq:XP_005167636 (1) |
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| RefSeq:XP_005167647 (1) |
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| RefSeq:XP_009302939 (1) |
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| RefSeq:XP_021327829 (1) |
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| RefSeq:XP_021327830 (1) |
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| RefSeq:XP_021327833 (1) |
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| RefSeq:XP_021334416 (1) |
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| RefSeq:XP_021334567 (1) |
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| RefSeq:XP_021334568 (1) |
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| RefSeq:XP_021334569 (1) |
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| RefSeq:XP_021334570 (1) |
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| RefSeq:XP_694204 (1) |
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| GenPept:ABS88161 (1) | 1140 aa |
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| GenPept:ABS88160 (1) | 1078 aa |
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| GenPept:Q58EL7 (1) | 495 aa |
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| GenPept:AAI55820 (1) | 462 aa |
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| GenPept:AAH91849 (1) | 459 aa |
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| GenPept:AAH66406 (1) | 456 aa |
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| GenPept:Q6NYZ4 (1) | 456 aa |
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| GenPept:AAI29265 (1) | 370 aa |
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| GenPept:AAI64200 (1) | 370 aa |
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| GenPept:AAQ57588 (1) | 370 aa |
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| GenPept:Q6JWV8 (1) | 370 aa |
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| GenPept:AAI55229 (1) | 367 aa |
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| GenPept:AAH55205 (1) | 357 aa |
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| GenPept:CBF69568 (1) | 357 aa |
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| GenPept:CBU94324 (1) | 357 aa |
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| GenPept:AAH59482 (1) | 153 aa |
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| GenPept:AAI55198 (1) | 153 aa |
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| GenPept:AAH81527 (1) | 68 aa |
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| GenPept:AAI64430 (1) | 68 aa |
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| GenPept:AAH74074 (1) |
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RP71-68N21 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] cox17 (17) | RNA | RefSeq:NM_001004652 | 542 |
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| RNA | GenBank:EH490144 | 573 |
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| RNA | GenBank:GFIL01006899 | 565 |
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| RNA | GenBank:EH495356 | 544 |
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| RNA | GenBank:BC081527 | 519 |
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| RNA | GenBank:BC164430 | 274 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:CT027983 | 185833 | ||
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:Q66I53 | 68 |
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| Polypeptide | RefSeq:NP_001004652 |
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| Polypeptide | GenPept:AAI64430 | 68 |
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| Polypeptide | GenPept:AAH81527 | 68 |
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| [GENE] hao2 (9) | RNA | RefSeq:XM_005167544 | 1869 |
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| RNA | RefSeq:XM_005167545 | 1808 |
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| RNA | RefSeq:NM_200483 | 1808 |
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| RNA | GenBank:BC055205 | 1809 |
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| RNA | GenBank:GFIL01012291 | 1774 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:BX511129 | 152922 | ||
| Genomic | GenBank:HC948167 | 1809 |
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| Genomic | GenBank:HB890758 | 1809 |
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| Polypeptide | UniProtKB:A0A8M2BF11 | 378 |
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| Polypeptide | UniProtKB:Q7SXX8 | 357 |
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| Polypeptide | UniProtKB:F1QCD8 | 357 |
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| Polypeptide | RefSeq:XP_005167602 |
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| Polypeptide | RefSeq:XP_005167601 |
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| Polypeptide | RefSeq:NP_956777 | 357 |
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| Polypeptide | GenPept:CBU94324 | 357 |
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| Polypeptide | GenPept:CBF69568 | 357 |
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| Polypeptide | GenPept:AAH55205 | 357 |
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| [GENE] hsd3b1 (26) | RNA | RefSeq:XM_689112 |
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| RNA | RefSeq:XM_021472158 |
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| RNA | RefSeq:NM_001386297 |
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| RNA | GenBank:BC074074 | 1550 |
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| RNA | GenBank:EH538581 | 930 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:F1QSA2 | 374 |
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| Polypeptide | UniProtKB:A0A8M9PLD3 | 311 |
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| Polypeptide | RefSeq:XP_694204 |
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| Polypeptide | RefSeq:XP_021327833 |
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| Polypeptide | RefSeq:NP_001373226 |
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| Polypeptide | GenPept:AAH74074 |
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| [GENE] lats2 (19) | RNA | RefSeq:XM_021478741 | 7289 |
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| RNA | RefSeq:XM_005167579 | 7273 |
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| RNA | RefSeq:NM_001423734 | 7103 |
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| RNA | RefSeq:NM_001123307 | 6980 |
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| RNA | RefSeq:NM_001128256 | 6794 |
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| RNA | GenBank:GDQH01004461 | 7002 |
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| RNA | GenBank:EF524200 | 3670 |
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| RNA | GenBank:EF524199 | 3484 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:CT027983 | 185833 | ||
| Genomic | GenBank:BX511129 | 152922 | ||
| Genomic | GenBank:BX936339 | 38616 | ||
| Polypeptide | UniProtKB:B2BJC1 | 1140 |
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| Polypeptide | UniProtKB:B0S8I4 | 1140 |
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| Polypeptide | UniProtKB:B2BJC0 | 1078 |
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| Polypeptide | RefSeq:XP_021334416 |
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| Polypeptide | RefSeq:XP_005167636 |
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| Polypeptide | RefSeq:NP_001410663 |
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| Polypeptide | RefSeq:NP_001121728 |
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| Polypeptide | RefSeq:NP_001116779 |
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| Polypeptide | GenPept:ABS88161 | 1140 |
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| Polypeptide | GenPept:ABS88160 | 1078 |
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| [GENE] pla1a (9) | RNA | RefSeq:NM_207056 | 3392 |
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| RNA | GenBank:GFIL01030493 | 3955 |
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| RNA | GenBank:BC066406 | 3392 |
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| RNA | GenBank:BC155819 | 2675 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:Q6NYZ4 | 456 |
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| Polypeptide | RefSeq:NP_996939 |
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| Polypeptide | GenPept:AAI55820 | 462 |
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| Polypeptide | GenPept:Q6NYZ4 | 456 |
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| Polypeptide | GenPept:AAH66406 | 456 |
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| [GENE] popdc2 (9) | RNA | RefSeq:NM_001020800 | 2661 |
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| RNA | RefSeq:NM_001114450 | 2508 |
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| RNA | GenBank:GDQH01009273 | 3144 |
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| RNA | GenBank:AY293119 | 2661 |
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| RNA | GenBank:BC129264 | 2660 |
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| RNA | GenBank:BC155228 | 2508 |
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| RNA | GenBank:BC164200 | 1180 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:CT027983 | 185833 | ||
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:Q6JWV8 | 370 |
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| Polypeptide | UniProtKB:A9JT76 | 367 |
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| Polypeptide | RefSeq:NP_001107922 |
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| Polypeptide | RefSeq:NP_001018636 |
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| Polypeptide | GenPept:Q6JWV8 | 370 |
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| Polypeptide | GenPept:AAQ57588 | 370 |
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| Polypeptide | GenPept:AAI64200 | 370 |
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| Polypeptide | GenPept:AAI29265 | 370 |
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| Polypeptide | GenPept:AAI55229 | 367 |
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| [GENE] sap18 (9) | RNA | RefSeq:NM_200720 | 916 |
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| RNA | GenBank:BC090729 | 1745 |
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| RNA | GenBank:BC155197 | 872 |
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| RNA | GenBank:BC059482 | 855 |
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| RNA | GenBank:EH440312 | 830 |
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| RNA | GenBank:BI709589 | 619 |
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| RNA | GenBank:GFIL01034420 | 459 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:CT027983 | 185833 | ||
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:Q6PC41 | 153 |
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| Polypeptide | RefSeq:NP_957014 |
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| Polypeptide | GenPept:AAI55198 | 153 |
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| Polypeptide | GenPept:AAH59482 | 153 |
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| [GENE] si:rp71-68n21.9 (4) | RNA | RefSeq:XM_021478895 |
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| RNA | RefSeq:XM_021478894 |
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| RNA | RefSeq:XM_021478893 |
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| RNA | RefSeq:XM_021478892 |
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| RNA | RefSeq:XM_021472155 |
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| RNA | RefSeq:XM_021472154 |
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| RNA | RefSeq:XM_009304664 |
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| RNA | RefSeq:XM_001923378 |
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| RNA | GenBank:GDQH01017796 |
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| RNA | GenBank:DR721840 | 750 |
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| RNA | GenBank:DR729106 | 715 |
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| RNA | GenBank:CD597771 | 650 |
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| RNA | GenBank:EB974499 | 552 |
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| RNA | GenBank:CD603519 | 445 |
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|
| RNA | GenBank:EB984405 | 421 |
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|
| RNA | GenBank:CD600912 | 347 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:E9QHV0 | 686 |
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| Polypeptide | UniProtKB:A0A8M9QB93 | 684 |
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| Polypeptide | RefSeq:XP_021334570 |
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| Polypeptide | RefSeq:XP_021334569 |
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| Polypeptide | RefSeq:XP_021334568 |
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| Polypeptide | RefSeq:XP_021334567 |
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| Polypeptide | RefSeq:XP_021327830 |
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| Polypeptide | RefSeq:XP_021327829 |
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| Polypeptide | RefSeq:XP_009302939 |
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| Polypeptide | RefSeq:XP_001923413 | 684 |
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| [GENE] ska3 (7) | RNA | RefSeq:NM_001202437 | 1790 |
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| RNA | RefSeq:XM_005167590 | 1765 |
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| RNA | GenBank:GFIL01038129 | 2339 |
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| RNA | GenBank:BC091849 | 1589 |
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| RNA | GenBank:EH501612 | 994 |
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| RNA | GenBank:EH578587 | 906 |
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| RNA | GenBank:EH595954 | 882 |
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|
| RNA | GenBank:EH478847 | 882 |
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| Genomic | GenBank:CU151884 | 200118 | Blast at MegaBLAST | |
| Genomic | GenBank:BX511129 | 152922 | ||
| Polypeptide | UniProtKB:Q58EL7 | 495 |
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| Polypeptide | UniProtKB:A0A8M1P1R9 | 495 |
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| Polypeptide | RefSeq:XP_005167647 |
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| Polypeptide | RefSeq:NP_001189366 |
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| Polypeptide | GenPept:Q58EL7 | 495 |
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| Polypeptide | GenPept:AAH91849 | 459 |
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