ZFIN ID: ZDB-BAC-050218-639
SEQUENCE INFORMATION
BAC Name: CH211-114C12
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001002300 (1) 2724 nt
RefSeq:NM_212786 (1) 2506 nt
RefSeq:NM_213393 (1) 2377 nt
RefSeq:NM_001271820 (1) 2236 nt
RefSeq:NM_131327 (1) 2233 nt
RefSeq:NM_001328587 (1) 2204 nt
RefSeq:NM_001007309 (1) 2131 nt
RefSeq:NM_001328588 (1) 1964 nt
RefSeq:NM_200973 (1) 1953 nt
RefSeq:NM_001013260 (1) 1374 nt
RefSeq:NM_001128328 (1) 1287 nt
RefSeq:NM_001289065 (1) 1203 nt
RefSeq:NM_001006082 (1) 1075 nt
RefSeq:NM_001100092 (1)
RefSeq:NM_001327937 (1)
RefSeq:XM_021476021 (1) 3905 nt
RefSeq:XM_005165118 (1) 3843 nt
RefSeq:XM_021476016 (1) 3392 nt
RefSeq:XM_017356047 (1) 2338 nt
RefSeq:XM_005165134 (1) 2336 nt
RefSeq:XM_021476040 (1) 2110 nt
RefSeq:XM_005165131 (1) 2097 nt
RefSeq:XM_005165101 (1) 2068 nt
RefSeq:XM_021476127 (1) 2005 nt
RefSeq:XM_005165104 (1) 1918 nt
RefSeq:XM_005165103 (1) 1488 nt
RefSeq:XM_009301270 (1)
RefSeq:XM_009301271 (1)
RefSeq:XM_009301272 (1)
RefSeq:XM_009301273 (1)
RefSeq:XM_009301274 (1)
RefSeq:XM_009301275 (1)
RefSeq:XM_021471602 (1)
RefSeq:XM_021475963 (1)
RefSeq:XM_021476347 (1)
RefSeq:XR_661573 (1)
GenBank:GDQH01005530 (1) 3701 nt
GenBank:GFIL01029833 (1) 3463 nt
GenBank:GFIL01041703 (1) 3360 nt
GenBank:GFIL01011896 (1) 2803 nt
GenBank:AY648708 (1) 2724 nt
GenBank:BC124136 (1) 2701 nt
GenBank:BC045856 (1) 2506 nt
GenBank:BC071373 (1) 2377 nt
GenBank:BC060928 (1) 2292 nt
GenBank:BC164040 (1) 2266 nt
GenBank:AF365873 (1) 2199 nt
GenBank:GFIL01035416 (1) 2196 nt
GenBank:GDQH01007122 (1) 2164 nt
GenBank:BC085649 (1) 2131 nt
GenBank:GFIL01026895 (1) 2114 nt
GenBank:U60804 (1) 2105 nt
GenBank:BC096776 (1) 1954 nt
GenBank:GDQQ01008295 (1) 1716 nt
GenBank:BC054126 (1) 1523 nt
GenBank:GDQH01025522 (1) 1414 nt
GenBank:BC095597 (1) 1380 nt
GenBank:GFIL01011091 (1) 1351 nt
GenBank:BC065894 (1) 1232 nt
GenBank:BC056701 (1) 1210 nt
GenBank:KM981743 (1) 1195 nt
GenBank:BC164184 (1) 1153 nt
GenBank:BC083238 (1) 1077 nt
GenBank:KM981742 (1) 1051 nt
GenBank:KM981741 (1) 1047 nt
GenBank:EH435782 (1) 888 nt
GenBank:CK684231 (1) 821 nt
GenBank:CV484757 (1) 815 nt
GenBank:DT068912 (1) 809 nt
GenBank:CT619016 (1) 779 nt
GenBank:CK141938 (1) 777 nt
GenBank:EH479527 (1) 765 nt
GenBank:CT704385 (1) 752 nt
GenBank:CT635558 (1) 664 nt
GenBank:EH548853 (1) 639 nt
GenBank:AI877718 (1) 590 nt
GenBank:AL922761 (1) 539 nt
GenBank:AI497541 (1) 530 nt
GenBank:BC164226 (1) 502 nt
GenBank:AI793536 (1) 496 nt
GenBank:AB055667 (1) 407 nt
GenBank:EB987061 (1) 393 nt
GenBank:U46693 (1) 218 nt
GenBank:GDQQ01060514 (1)
GenBank:GFIL01035419 (1)
Genomic GenBank:BX119902 (1) 170241 nt
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GenBank:AL928875 158038 nt
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GenBank:CR792423 (1) 154548 nt
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GenBank:BX510925 (1) 75254 nt
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GenBank:AY582140 (1) 3280 nt
GenBank:FI495097 (1) 533 nt
GenBank:KM981739 (1) 503 nt
GenBank:KM981740 (1) 499 nt
GenBank:FI495122 (1) 197 nt
Polypeptide UniProtKB:A0A2R8Q5N9 (1) 1020 aa
UniProtKB:A0A8M3B293 (1) 1017 aa
UniProtKB:A0A8M3AZD4 (1) 1016 aa
UniProtKB:A0A8M9PWZ4 (1) 1015 aa
UniProtKB:A0A8M3AS12 (1) 993 aa
UniProtKB:A0A8M3B9F6 (1) 979 aa
UniProtKB:A0A8M3AS82 (1) 952 aa
UniProtKB:A0A0R4ID09 (1) 733 aa
UniProtKB:Q7ZVH8 (1) 732 aa
UniProtKB:A0A8M9Q888 (1) 644 aa
UniProtKB:A0A8M3B296 (1) 642 aa
UniProtKB:Q6DRQ1 (1) 613 aa
UniProtKB:A2BEP0 (1) 428 aa
UniProtKB:A0A8M9PKM7 (1) 419 aa
UniProtKB:A0A0R4IT09 (1) 400 aa
UniProtKB:Q6P948 (1) 393 aa
UniProtKB:G1K2L5 (1) 374 aa
UniProtKB:P79734 (1) 373 aa
UniProtKB:A0A8M2BCD8 (1) 370 aa
UniProtKB:A0A8M9QDM7 (1) 370 aa
UniProtKB:B0R0M3 (1) 369 aa
UniProtKB:Q7SZ61 (1) 361 aa
UniProtKB:A0A8M9P8U7 (1) 346 aa
UniProtKB:X1WEC4 (1) 345 aa
UniProtKB:A0A0B4VFS7 (1) 261 aa
UniProtKB:A0A8M2BCE6 (1) 257 aa
UniProtKB:A0A8M9PK13 (1) 245 aa
UniProtKB:Q5U395 (1) 245 aa
UniProtKB:Q6NZZ7 (1) 163 aa
UniProtKB:Q5XJR0 (1) 144 aa
UniProtKB:Q6PSS4 (1) 122 aa
RefSeq:NP_997951 (1) 732 aa
RefSeq:NP_001002300 (1) 613 aa
RefSeq:NP_001121800 (1) 428 aa
RefSeq:NP_001006082 (1)
RefSeq:NP_001007310 (1)
RefSeq:NP_001013278 (1)
RefSeq:NP_001258749 (1)
RefSeq:NP_001275994 (1)
RefSeq:NP_001314866 (1)
RefSeq:NP_001315516 (1)
RefSeq:NP_001315517 (1)
RefSeq:NP_571402 (1)
RefSeq:NP_957267 (1)
RefSeq:NP_998558 (1)
RefSeq:XP_005165175 (1) 733 aa
RefSeq:XP_005165158 (1)
RefSeq:XP_005165160 (1)
RefSeq:XP_005165161 (1)
RefSeq:XP_005165188 (1)
RefSeq:XP_005165191 (1)
RefSeq:XP_009299545 (1)
RefSeq:XP_009299546 (1)
RefSeq:XP_009299547 (1)
RefSeq:XP_009299548 (1)
RefSeq:XP_009299549 (1)
RefSeq:XP_009299550 (1)
RefSeq:XP_017211536 (1)
RefSeq:XP_021327277 (1)
RefSeq:XP_021331638 (1)
RefSeq:XP_021331691 (1)
RefSeq:XP_021331696 (1)
RefSeq:XP_021331715 (1)
RefSeq:XP_021331802 (1)
RefSeq:XP_021332022 (1)
GenPept:AAH45856 (1) 732 aa
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GenPept:AAI64040 (1) 732 aa
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GenPept:AAI24137 (1) 613 aa
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GenPept:AAT68026 (1) 613 aa
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GenPept:AAH60928 (1) 393 aa
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GenPept:AAH71373 (1) 393 aa
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GenPept:AAH95597 (1) 374 aa
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GenPept:AAB40617 (1) 373 aa
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GenPept:P79734 (1) 373 aa
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GenPept:AAO85406 (1) 369 aa
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GenPept:AAH54126 (1) 361 aa
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GenPept:AAH96776 (1) 361 aa
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GenPept:AAI64184 (1) 361 aa
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GenPept:AJD19814 (1) 294 aa
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GenPept:AJD19812 (1) 289 aa
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GenPept:AJD19813 (1) 261 aa
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GenPept:AAH85649 (1) 245 aa
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GenPept:Q5U395 (1) 245 aa
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GenPept:AAH65894 (1) 163 aa
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GenPept:AAH56701 (1) 144 aa
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GenPept:AAH83238 (1) 144 aa
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GenPept:AAI64226 (1) 144 aa
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GenPept:AAS91376 (1) 122 aa
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GenPept:AAA97408 (1) 73 aa
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GenPept:BAB62802 (1) 65 aa
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CH211-114C12 CONTAINS
Marker Type Accession # Length (nt/aa) Analysis
[GENE] capga (5) RNA RefSeq:NM_001289065 1203
  RNA GenBank:GDQH01025522 1414
  RNA GenBank:EB987061 393
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Genomic GenBank:FI495122 197
  Polypeptide UniProtKB:X1WEC4 345
  Polypeptide RefSeq:NP_001275994
[GENE] ctdnep1a (10) RNA RefSeq:NM_001007309 2131
  RNA RefSeq:XM_021476127 2005
  RNA GenBank:GDQH01007122 2164
  RNA GenBank:BC085649 2131
  Genomic GenBank:AL928875 158038
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  Polypeptide UniProtKB:Q5U395 245
  Polypeptide UniProtKB:A0A8M9PK13 245
  Polypeptide RefSeq:XP_021331802
  Polypeptide RefSeq:NP_001007310
  Polypeptide GenPept:Q5U395 245
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  Polypeptide GenPept:AAH85649 245
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[GENE] eif1axa (12) RNA RefSeq:NM_001006082 1075
  RNA GenBank:GDQQ01008295 1716
  RNA GenBank:BC083238 1077
  RNA GenBank:BC164226 502
  Genomic GenBank:AL928875 158038
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  Polypeptide UniProtKB:Q5XJR0 144
  Polypeptide RefSeq:NP_001006082
  Polypeptide GenPept:AAI64226 144
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  Polypeptide GenPept:AAH83238 144
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[GENE] gabarapa (21) RNA RefSeq:NM_001013260 1374
  RNA GenBank:GFIL01011091 1351
  RNA GenBank:BC065894 1232
  RNA GenBank:BC056701 1210
  RNA GenBank:EH548853 639
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Genomic GenBank:AY582140 3280
  Polypeptide UniProtKB:Q6NZZ7 163
  Polypeptide UniProtKB:Q6PSS4 122
  Polypeptide RefSeq:NP_001013278
  Polypeptide GenPept:AAH65894 163
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  Polypeptide GenPept:AAH56701 144
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  Polypeptide GenPept:AAS91376 122
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[GENE] gps2 (9) RNA RefSeq:XM_017356047 2338
  RNA RefSeq:XM_021476040 2110
  RNA RefSeq:XM_005165131 2097
  RNA RefSeq:NM_200973 1953
  RNA GenBank:GFIL01011896 2803
  RNA GenBank:BC096776 1954
  RNA GenBank:BC054126 1523
  RNA GenBank:BC164184 1153
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Genomic GenBank:FI495097 533
  Polypeptide UniProtKB:A0A8M9QDM7 370
  Polypeptide UniProtKB:Q7SZ61 361
  Polypeptide RefSeq:XP_021331715
  Polypeptide RefSeq:XP_017211536
  Polypeptide RefSeq:XP_005165188
  Polypeptide RefSeq:NP_957267
  Polypeptide GenPept:AAI64184 361
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  Polypeptide GenPept:AAH96776 361
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  Polypeptide GenPept:AAH54126 361
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[GENE] map7d2a (7) RNA RefSeq:XR_661573
  RNA RefSeq:XM_021475963
  RNA RefSeq:XM_009301275
  RNA RefSeq:XM_009301274
  RNA RefSeq:XM_009301273
  RNA RefSeq:XM_009301272
  RNA RefSeq:XM_009301271
  RNA RefSeq:XM_009301270
  RNA RefSeq:NM_001327937
  RNA RefSeq:NM_001100092
  RNA GenBank:GDQQ01060514
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:BX510925 75254
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  Polypeptide UniProtKB:A0A2R8Q5N9 1020
  Polypeptide UniProtKB:A0A8M3B293 1017
  Polypeptide UniProtKB:A0A8M3AZD4 1016
  Polypeptide UniProtKB:A0A8M9PWZ4 1015
  Polypeptide UniProtKB:A0A8M3AS12 993
  Polypeptide UniProtKB:A0A8M3B9F6 979
  Polypeptide UniProtKB:A0A8M3AS82 952
  Polypeptide UniProtKB:A0A8M3B296 642
  Polypeptide RefSeq:XP_021331638
  Polypeptide RefSeq:XP_009299550
  Polypeptide RefSeq:XP_009299549
  Polypeptide RefSeq:XP_009299548
  Polypeptide RefSeq:XP_009299547
  Polypeptide RefSeq:XP_009299546
  Polypeptide RefSeq:XP_009299545
  Polypeptide RefSeq:NP_001314866
[GENE] mrps31 (11) RNA RefSeq:NM_001128328 1287
  RNA GenBank:GFIL01026895 2114
  RNA GenBank:CK684231 821
  RNA GenBank:AI877718 590
  RNA GenBank:AI497541 530
  RNA GenBank:AI793536 496
  RNA GenBank:AB055667 407
  Genomic GenBank:BX119902 170241
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  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Polypeptide UniProtKB:A2BEP0 428
  Polypeptide RefSeq:NP_001121800 428
  Polypeptide GenPept:BAB62802 65
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[GENE] pdha1a (22) RNA RefSeq:NM_213393 2377
  RNA RefSeq:XM_005165134 2336
  RNA GenBank:GFIL01029833 3463
  RNA GenBank:BC071373 2377
  RNA GenBank:BC060928 2292
  Genomic GenBank:AL928875 158038
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  Polypeptide UniProtKB:A0A0R4IT09 400
  Polypeptide UniProtKB:Q6P948 393
  Polypeptide RefSeq:XP_005165191
  Polypeptide RefSeq:NP_998558
  Polypeptide GenPept:AAH71373 393
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  Polypeptide GenPept:AAH60928 393
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[GENE] rps6ka3a (18) RNA RefSeq:XM_021476021 3905
  RNA RefSeq:XM_005165118 3843
  RNA RefSeq:NM_212786 2506
  RNA GenBank:GDQH01005530 3701
  RNA GenBank:BC045856 2506
  RNA GenBank:BC164040 2266
  Genomic GenBank:AL928875 158038
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  Polypeptide UniProtKB:A0A0R4ID09 733
  Polypeptide UniProtKB:Q7ZVH8 732
  Polypeptide UniProtKB:A0A8M9Q888 644
  Polypeptide RefSeq:XP_021331696
  Polypeptide RefSeq:XP_005165175 733
  Polypeptide RefSeq:NP_997951 732
  Polypeptide GenPept:AAI64040 732
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  Polypeptide GenPept:AAH45856 732
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[GENE] si:ch211-114c12.2 (5) RNA RefSeq:XM_021476016 3392
  RNA RefSeq:NM_001002300 2724
  RNA GenBank:AY648708 2724
  RNA GenBank:BC124136 2701
  RNA GenBank:GFIL01035416 2196
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Polypeptide UniProtKB:Q6DRQ1 613
  Polypeptide RefSeq:XP_021331691
  Polypeptide RefSeq:NP_001002300 613
  Polypeptide GenPept:AAT68026 613
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  Polypeptide GenPept:AAI24137 613
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[GENE] si:ch211-114c12.5 (1) RNA RefSeq:XM_021476347
  RNA RefSeq:XM_021471602
  RNA GenBank:GFIL01035419
  RNA GenBank:DT068912 809
  RNA GenBank:CK141938 777
  RNA GenBank:AL922761 539
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Polypeptide UniProtKB:A0A8M9PKM7 419
  Polypeptide UniProtKB:A0A8M9P8U7 346
  Polypeptide RefSeq:XP_021332022
  Polypeptide RefSeq:XP_021327277
[GENE] tp53 (813) RNA RefSeq:NM_001271820 2236
  RNA RefSeq:NM_131327 2233
  RNA RefSeq:NM_001328587 2204
  RNA RefSeq:XM_005165101 2068
  RNA RefSeq:NM_001328588 1964
  RNA RefSeq:XM_005165104 1918
  RNA RefSeq:XM_005165103 1488
  RNA GenBank:GFIL01041703 3360
  RNA GenBank:AF365873 2199
  RNA GenBank:U60804 2105
  RNA GenBank:BC095597 1380
  RNA GenBank:KM981743 1195
  RNA GenBank:KM981742 1051
  RNA GenBank:KM981741 1047
  RNA GenBank:EH435782 888
  RNA GenBank:CV484757 815
  RNA GenBank:CT619016 779
  RNA GenBank:EH479527 765
  RNA GenBank:CT704385 752
  RNA GenBank:CT635558 664
  RNA GenBank:U46693 218
  Genomic GenBank:AL928875 158038
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  Genomic GenBank:CR792423 154548
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  Genomic GenBank:KM981739 503
  Genomic GenBank:KM981740 499
  Polypeptide UniProtKB:G1K2L5 374
  Polypeptide UniProtKB:P79734 373
  Polypeptide UniProtKB:A0A8M2BCD8 370
  Polypeptide UniProtKB:B0R0M3 369
  Polypeptide UniProtKB:A0A0B4VFS7 261
  Polypeptide UniProtKB:A0A8M2BCE6 257
  Polypeptide RefSeq:XP_005165161
  Polypeptide RefSeq:XP_005165160
  Polypeptide RefSeq:XP_005165158
  Polypeptide RefSeq:NP_571402
  Polypeptide RefSeq:NP_001315517
  Polypeptide RefSeq:NP_001315516
  Polypeptide RefSeq:NP_001258749
  Polypeptide GenPept:AAH95597 374
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  Polypeptide GenPept:P79734 373
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  Polypeptide GenPept:AAB40617 373
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  Polypeptide GenPept:AAO85406 369
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  Polypeptide GenPept:AJD19814 294
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  Polypeptide GenPept:AJD19812 289
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  Polypeptide GenPept:AJD19813 261
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  Polypeptide GenPept:AAA97408 73
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