| ZFIN ID: ZDB-BAC-050218-2387 |
| SEQUENCE INFORMATION |
| BAC Name: | CH211-79L20 |
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SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001080576 (1) | 3661 nt |
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| RefSeq:NM_194422 (1) | 3373 nt |
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| RefSeq:NM_001423696 (1) | 3361 nt |
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| RefSeq:NM_001111158 (1) | 2108 nt |
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| RefSeq:NM_001045849 (1) | 1557 nt |
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| RefSeq:XM_005158034 (1) | 5742 nt |
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| RefSeq:XM_005158035 (1) | 5733 nt |
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| RefSeq:XM_683656 (1) | 5706 nt |
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| RefSeq:XM_005158027 (1) | 3731 nt |
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| RefSeq:XM_683887 (1) | 3279 nt |
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| RefSeq:XM_009292363 (1) | 3173 nt |
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| RefSeq:XM_002664905 (1) | 2446 nt |
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| RefSeq:XM_009292366 (1) | 2407 nt |
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| GenBank:GDQH01010834 (1) | 5703 nt |
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| GenBank:GFIL01029883 (1) | 4009 nt |
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| GenBank:GDQH01006415 (1) | 3843 nt |
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| GenBank:GDQH01000517 (1) | 3837 nt |
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| GenBank:BC129044 (1) | 3661 nt |
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| GenBank:GFIL01032157 (1) | 3564 nt |
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| GenBank:AF428098 (1) | 3373 nt |
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| GenBank:BC044347 (1) | 3325 nt |
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| GenBank:BC063935 (1) | 3203 nt |
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| GenBank:BC155791 (1) | 2108 nt |
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| GenBank:BC134218 (1) | 2027 nt |
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| GenBank:BC122113 (1) | 1557 nt |
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| GenBank:GDQH01018256 (1) | 1534 nt |
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| GenBank:CK027707 (1) | 1048 nt |
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| GenBank:FJ392611 (1) | 1036 nt |
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| GenBank:EG575332 (1) | 922 nt |
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| GenBank:CA471469 (1) | 917 nt |
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| GenBank:CK684153 (1) | 895 nt |
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| GenBank:CA474721 (1) | 891 nt |
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| GenBank:EE310598 (1) | 880 nt |
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| GenBank:KJ826437 (1) | 876 nt |
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| GenBank:CA473663 (1) | 850 nt |
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| GenBank:CT622054 (1) | 739 nt |
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| GenBank:CK030350 (1) | 726 nt |
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| GenBank:GDQH01032700 (1) | 724 nt |
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| GenBank:CT697369 (1) | 696 nt |
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| GenBank:EB876637 (1) | 693 nt |
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| GenBank:CT622055 (1) | 662 nt |
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| GenBank:AL920179 (1) | 539 nt |
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| GenBank:AW306006 (1) | 520 nt |
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| GenBank:CO358103 (1) | 520 nt |
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| GenBank:CK690221 (1) | 487 nt |
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| GenBank:CT625578 (1) | 481 nt |
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| GenBank:EE209001 (1) | 481 nt |
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| GenBank:CK676871 (1) | 461 nt |
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| GenBank:AA605867 (1) | 447 nt |
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| GenBank:AW420279 (1) | 436 nt |
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| GenBank:AL915770 (1) | 412 nt |
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| GenBank:EB911433 (1) | 317 nt |
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| Genomic | GenBank:BX511010 | 156317 nt | |
| GenBank:BX537166 (2) | 60424 nt | ||
| GenBank:CR391916 (2) | 21407 nt |
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| Polypeptide | UniProtKB:A0A8M2B4B7 (1) | 1850 aa |
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| UniProtKB:A0A0R4IAI1 (1) | 1847 aa |
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| UniProtKB:A0A8N7T781 (1) | 1838 aa |
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| UniProtKB:E9QHY4 (1) | 917 aa |
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| UniProtKB:Q90X63 (1) | 868 aa |
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| UniProtKB:A0A8M2B4A5 (1) | 718 aa |
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| UniProtKB:A1L1G1 (1) | 714 aa |
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| UniProtKB:A9JRU2 (1) | 519 aa |
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| UniProtKB:A0A8M1RHR1 (1) | 292 aa |
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| UniProtKB:Q0P4E7 (1) | 291 aa |
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| RefSeq:NP_919403 (1) | 868 aa |
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| RefSeq:NP_001104628 (1) | 519 aa |
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| RefSeq:NP_001039314 (1) |
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| RefSeq:NP_001074045 (1) |
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| RefSeq:NP_001410625 (1) |
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| RefSeq:XP_688979 (1) | 917 aa |
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| RefSeq:XP_002664951 (1) | 292 aa |
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| RefSeq:XP_005158084 (1) |
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| RefSeq:XP_005158091 (1) |
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| RefSeq:XP_005158092 (1) |
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| RefSeq:XP_009290638 (1) |
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| RefSeq:XP_009290641 (1) |
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| RefSeq:XP_688748 (1) |
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| GenPept:AAH44347 (1) | 868 aa |
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| GenPept:AAH63935 (1) | 868 aa |
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| GenPept:AAL29444 (1) | 868 aa |
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| GenPept:A1L1G1 (1) | 714 aa |
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| GenPept:AAI29045 (1) | 714 aa |
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| GenPept:AAI55792 (1) | 519 aa |
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| GenPept:AAI22114 (1) | 291 aa |
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| GenPept:AIJ28971 (1) | 291 aa |
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| GenPept:AAI34219 (1) | 237 aa |
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CH211-79L20 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] cdh17 (94) | RNA | RefSeq:NM_194422 | 3373 |
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| RNA | RefSeq:NM_001423696 | 3361 |
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| RNA | GenBank:GDQH01000517 | 3837 |
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| RNA | GenBank:AF428098 | 3373 |
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| RNA | GenBank:BC044347 | 3325 |
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| RNA | GenBank:BC063935 | 3203 |
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| RNA | GenBank:CK027707 | 1048 |
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| RNA | GenBank:CA471469 | 917 |
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| RNA | GenBank:CK684153 | 895 |
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| RNA | GenBank:CA474721 | 891 |
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| RNA | GenBank:CA473663 | 850 |
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| RNA | GenBank:CK030350 | 726 |
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| RNA | GenBank:EB876637 | 693 |
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| RNA | GenBank:EB911433 | 317 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Polypeptide | UniProtKB:Q90X63 | 868 |
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| Polypeptide | RefSeq:NP_919403 | 868 |
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| Polypeptide | RefSeq:NP_001410625 |
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| Polypeptide | GenPept:AAL29444 | 868 |
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| Polypeptide | GenPept:AAH63935 | 868 |
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| Polypeptide | GenPept:AAH44347 | 868 |
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| [GENE] esrp1 (15) | RNA | RefSeq:XM_005158027 | 3731 |
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| RNA | RefSeq:NM_001080576 | 3661 |
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| RNA | GenBank:GDQH01006415 | 3843 |
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| RNA | GenBank:BC129044 | 3661 |
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| RNA | GenBank:BC134218 | 2027 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Genomic | GenBank:BX537166 | 60424 | ||
| Polypeptide | UniProtKB:A0A8M2B4A5 | 718 |
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| Polypeptide | UniProtKB:A1L1G1 | 714 |
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| Polypeptide | RefSeq:XP_005158084 |
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| Polypeptide | RefSeq:NP_001074045 |
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| Polypeptide | GenPept:AAI29045 | 714 |
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| Polypeptide | GenPept:A1L1G1 | 714 |
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| Polypeptide | GenPept:AAI34219 | 237 |
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| [GENE] gem (8) | RNA | RefSeq:NM_001045849 | 1557 |
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| RNA | GenBank:BC122113 | 1557 |
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| RNA | GenBank:GDQH01018256 | 1534 |
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| RNA | GenBank:KJ826437 | 876 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Polypeptide | UniProtKB:Q0P4E7 | 291 |
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| Polypeptide | RefSeq:NP_001039314 |
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| Polypeptide | GenPept:AIJ28971 | 291 |
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| Polypeptide | GenPept:AAI22114 | 291 |
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| [GENE] pdp1 (8) | RNA | RefSeq:NM_001111158 | 2108 |
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| RNA | GenBank:GFIL01029883 | 4009 |
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| RNA | GenBank:BC155791 | 2108 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Genomic | GenBank:CR391916 | 21407 |
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| Polypeptide | UniProtKB:A9JRU2 | 519 |
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| Polypeptide | RefSeq:NP_001104628 | 519 |
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| Polypeptide | GenPept:AAI55792 | 519 |
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| [GENE] rad54b (9) | RNA | RefSeq:XM_683887 | 3279 |
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| RNA | GenBank:GFIL01032157 | 3564 |
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| RNA | GenBank:EG575332 | 922 |
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| RNA | GenBank:EE310598 | 880 |
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| RNA | GenBank:AL920179 | 539 |
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| RNA | GenBank:CO358103 | 520 |
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| RNA | GenBank:CK690221 | 487 |
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| RNA | GenBank:EE209001 | 481 |
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| RNA | GenBank:CT625578 | 481 |
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| RNA | GenBank:CK676871 | 461 |
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| RNA | GenBank:AL915770 | 412 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Polypeptide | UniProtKB:E9QHY4 | 917 |
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| Polypeptide | RefSeq:XP_688979 | 917 |
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| [GENE] rnf41l (6) | RNA | RefSeq:XM_009292363 | 3173 |
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| RNA | RefSeq:XM_002664905 | 2446 |
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| RNA | RefSeq:XM_009292366 | 2407 |
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| RNA | GenBank:FJ392611 | 1036 |
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| RNA | GenBank:CT622054 | 739 |
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| RNA | GenBank:GDQH01032700 | 724 |
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| RNA | GenBank:CT697369 | 696 |
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| RNA | GenBank:CT622055 | 662 |
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| RNA | GenBank:AW306006 | 520 |
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| RNA | GenBank:AW420279 | 436 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Polypeptide | UniProtKB:A0A8M1RHR1 | 292 |
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| Polypeptide | RefSeq:XP_009290641 |
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| Polypeptide | RefSeq:XP_009290638 |
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| Polypeptide | RefSeq:XP_002664951 | 292 |
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| [GENE] virma (7) | RNA | RefSeq:XM_005158034 | 5742 |
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| RNA | RefSeq:XM_005158035 | 5733 |
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| RNA | RefSeq:XM_683656 | 5706 |
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| RNA | GenBank:GDQH01010834 | 5703 |
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| RNA | GenBank:AA605867 | 447 |
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| Genomic | GenBank:BX511010 | 156317 | ||
| Polypeptide | UniProtKB:A0A8M2B4B7 | 1850 |
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| Polypeptide | UniProtKB:A0A0R4IAI1 | 1847 |
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| Polypeptide | UniProtKB:A0A8N7T781 | 1838 |
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| Polypeptide | RefSeq:XP_688748 |
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| Polypeptide | RefSeq:XP_005158092 |
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| Polypeptide | RefSeq:XP_005158091 |
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