| ZFIN ID: ZDB-BAC-050218-1307 |
| SEQUENCE INFORMATION |
| BAC Name: | CH211-167B20 |
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SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_214726 (1) | 5872 nt |
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| RefSeq:NM_200055 (1) | 3413 nt |
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| RefSeq:NM_001126482 (1) | 3181 nt |
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| RefSeq:NM_001014823 (1) | 2250 nt |
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| RefSeq:NM_199866 (1) | 2118 nt |
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| RefSeq:NM_001328536 (1) | 1856 nt |
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| RefSeq:NM_001329567 (1) | 1784 nt |
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| RefSeq:NM_001082874 (1) | 1630 nt |
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| RefSeq:XM_005167018 (1) | 3653 nt |
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| RefSeq:XM_005167031 (1) | 3153 nt |
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| RefSeq:XM_005167008 (1) | 1904 nt |
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| RefSeq:XM_009303986 (1) | 1900 nt |
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| RefSeq:XM_021478298 (1) | 1841 nt |
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| RefSeq:XM_003199091 (1) |
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| RefSeq:XM_005167122 (1) |
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| RefSeq:XM_021478446 (1) |
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| GenBank:GFIL01002829 (1) | 10208 nt |
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| GenBank:GFIL01034766 (1) | 6913 nt |
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| GenBank:AY495698 (1) | 5872 nt |
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| GenBank:GDQH01009620 (1) | 5437 nt |
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| GenBank:BC057534 (1) | 3413 nt |
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| GenBank:GDQQ01006969 (1) | 3114 nt |
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| GenBank:BC163710 (1) | 2361 nt |
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| GenBank:BC163715 (1) | 2361 nt |
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| GenBank:AY766120 (2) | 2250 nt |
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| GenBank:BC045338 (1) | 2072 nt |
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| GenBank:BC155114 (1) | 1877 nt |
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| GenBank:GFIL01041309 (1) | 1854 nt |
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| GenBank:BC154484 (1) | 1807 nt |
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| GenBank:GDQQ01016709 (1) | 1788 nt |
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| GenBank:FM881778 (1) | 1756 nt |
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| GenBank:FJ906821 (1) | 1715 nt |
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| GenBank:BC115190 (1) | 1705 nt |
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| GenBank:BC052225 (1) | 1579 nt |
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| GenBank:BC163356 (1) | 1371 nt |
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| GenBank:FM881779 (1) | 1090 nt |
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| GenBank:EH445611 (1) | 984 nt |
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| GenBank:CK028390 (1) | 785 nt |
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| GenBank:BC164975 (1) | 628 nt |
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| GenBank:AI397454 (1) | 379 nt |
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| GenBank:DQ840139 (1) | 306 nt |
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| GenBank:AI416110 (1) | 285 nt |
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| GenBank:GFIL01024439 (1) |
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| Genomic | GenBank:CR450704 (1) | 191439 nt | |
| GenBank:BX544876 | 154624 nt | ||
| GenBank:CR450776 (2) | 126881 nt | ||
| GenBank:FN435333 (1) | 12388 nt |
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| GenBank:FI495129 (1) | 159 nt |
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| GenBank:FI495100 (1) | 147 nt |
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| Polypeptide | UniProtKB:Q6RKB0 (1) | 1847 aa |
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| UniProtKB:A0A0R4IXC4 (1) | 1148 aa |
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| UniProtKB:A0A8M9QE64 (1) | 809 aa |
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| UniProtKB:Q6PFI8 (1) | 519 aa |
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| UniProtKB:A0A8M2BEB9 (1) | 518 aa |
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| UniProtKB:B0S6M0 (1) | 421 aa |
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| UniProtKB:A8WFW7 (1) | 419 aa |
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| UniProtKB:A0A8M2BEJ8 (1) | 331 aa |
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| UniProtKB:B0S6L8 (1) | 193 aa |
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| UniProtKB:Q7ZW08 (1) | 186 aa |
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| RefSeq:NP_999891 (1) | 1847 aa |
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| RefSeq:NP_001014823 (1) | 749 aa |
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| RefSeq:NP_956349 (1) | 519 aa |
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| RefSeq:NP_001119954 (1) |
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| RefSeq:NP_001315465 (1) |
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| RefSeq:NP_001316496 (1) |
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| RefSeq:NP_956160 (1) |
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| RefSeq:XP_005167088 (1) | 749 aa |
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| RefSeq:XP_005167075 (1) | 518 aa |
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| RefSeq:XP_003199139 (1) |
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| RefSeq:XP_005167065 (1) |
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| RefSeq:XP_005167179 (1) |
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| RefSeq:XP_009302261 (1) |
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| RefSeq:XP_021333973 (1) |
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| RefSeq:XP_021334121 (1) |
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| GenPept:AAR88506 (1) | 1847 aa |
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| GenPept:AAI63710 (1) | 749 aa |
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| GenPept:AAI63715 (1) | 749 aa |
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| GenPept:AAW56083 (1) | 749 aa |
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| GenPept:AAH57534 (1) | 519 aa |
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| GenPept:AAI15191 (1) | 421 aa |
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| GenPept:AAI54485 (1) | 419 aa |
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| GenPept:AAI63356 (1) | 419 aa |
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| GenPept:ACQ44666 (1) | 419 aa |
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| GenPept:CAT02413 (1) | 419 aa |
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| GenPept:CBA13547 (1) | 419 aa |
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| GenPept:CAT02414 (1) | 278 aa |
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| GenPept:AAH45338 (1) | 186 aa |
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| GenPept:AAI55115 (1) | 186 aa |
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| GenPept:AAI64975 (1) | 186 aa |
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CH211-167B20 CONTAINS
| Marker | Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| [GENE] cacna1sb (25) | RNA | RefSeq:NM_214726 | 5872 |
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| RNA | GenBank:GFIL01002829 | 10208 |
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| RNA | GenBank:AY495698 | 5872 |
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| Genomic | GenBank:BX544876 | 154624 | ||
| Polypeptide | UniProtKB:Q6RKB0 | 1847 |
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| Polypeptide | RefSeq:NP_999891 | 1847 |
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| Polypeptide | GenPept:AAR88506 | 1847 |
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| [GENE] foxp3a (39) | RNA | RefSeq:XM_021478298 | 1841 |
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| RNA | RefSeq:NM_001329567 | 1784 |
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| RNA | RefSeq:NM_001082874 | 1630 |
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| RNA | GenBank:GDQH01009620 | 5437 |
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| RNA | GenBank:BC154484 | 1807 |
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| RNA | GenBank:FM881778 | 1756 |
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| RNA | GenBank:FJ906821 | 1715 |
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| RNA | GenBank:BC163356 | 1371 |
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| RNA | GenBank:FM881779 | 1090 |
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| RNA | GenBank:CK028390 | 785 |
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| Genomic | GenBank:BX544876 | 154624 | ||
| Genomic | GenBank:FN435333 | 12388 |
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| Genomic | GenBank:FI495129 | 159 |
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| Polypeptide | UniProtKB:A8WFW7 | 419 |
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| Polypeptide | RefSeq:XP_021333973 |
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| Polypeptide | RefSeq:NP_001316496 |
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| Polypeptide | GenPept:CBA13547 | 419 |
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| Polypeptide | GenPept:CAT02413 | 419 |
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| Polypeptide | GenPept:ACQ44666 | 419 |
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| Polypeptide | GenPept:AAI63356 | 419 |
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| Polypeptide | GenPept:AAI54485 | 419 |
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| Polypeptide | GenPept:CAT02414 | 278 |
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| [GENE] sema3ga (11) | RNA | RefSeq:XM_005167031 | 3153 |
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| RNA | RefSeq:NM_001014823 | 2250 |
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| RNA | GenBank:GFIL01034766 | 6913 |
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| RNA | GenBank:BC163715 | 2361 |
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| RNA | GenBank:BC163710 | 2361 |
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| RNA | GenBank:AY766120 | 2250 |
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| Genomic | GenBank:BX544876 | 154624 | ||
| Genomic | GenBank:CR450776 | 126881 | ||
| Polypeptide | RefSeq:XP_005167088 | 749 |
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| Polypeptide | RefSeq:NP_001014823 | 749 |
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| Polypeptide | GenPept:AAW56083 | 749 |
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| Polypeptide | GenPept:AAI63715 | 749 |
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| Polypeptide | GenPept:AAI63710 | 749 |
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| [GENE] si:ch211-167b20.8 (2) | RNA | RefSeq:XM_021478446 |
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| RNA | RefSeq:XM_005167122 |
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| RNA | RefSeq:XM_003199091 |
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| RNA | GenBank:GFIL01024439 |
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| Genomic | GenBank:BX544876 | 154624 | ||
| Polypeptide | UniProtKB:A0A0R4IXC4 | 1148 |
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| Polypeptide | UniProtKB:A0A8M9QE64 | 809 |
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| Polypeptide | UniProtKB:A0A8M2BEJ8 | 331 |
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| Polypeptide | RefSeq:XP_021334121 |
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| Polypeptide | RefSeq:XP_005167179 |
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| Polypeptide | RefSeq:XP_003199139 |
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| [GENE] suv39h1b (14) | RNA | RefSeq:NM_001126482 | 3181 |
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| RNA | GenBank:GDQQ01006969 | 3114 |
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| RNA | GenBank:BC115190 | 1705 |
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| RNA | GenBank:BC052225 | 1579 |
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| RNA | GenBank:AI397454 | 379 |
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| RNA | GenBank:DQ840139 | 306 |
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| RNA | GenBank:AI416110 | 285 |
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| Genomic | GenBank:CR450704 | 191439 | ||
| Genomic | GenBank:BX544876 | 154624 | ||
| Genomic | GenBank:FI495100 | 147 |
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| Polypeptide | UniProtKB:B0S6M0 | 421 |
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| Polypeptide | RefSeq:NP_001119954 |
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| Polypeptide | GenPept:AAI15191 | 421 |
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| [GENE] tmem9 (7) | RNA | RefSeq:NM_199866 | 2118 |
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| RNA | RefSeq:XM_005167008 | 1904 |
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| RNA | RefSeq:XM_009303986 | 1900 |
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| RNA | RefSeq:NM_001328536 | 1856 |
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| RNA | GenBank:BC045338 | 2072 |
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| RNA | GenBank:BC155114 | 1877 |
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| RNA | GenBank:GFIL01041309 | 1854 |
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| RNA | GenBank:EH445611 | 984 |
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| RNA | GenBank:BC164975 | 628 |
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| Genomic | GenBank:BX544876 | 154624 | ||
| Polypeptide | UniProtKB:B0S6L8 | 193 |
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| Polypeptide | UniProtKB:Q7ZW08 | 186 |
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| Polypeptide | RefSeq:XP_009302261 |
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| Polypeptide | RefSeq:XP_005167065 |
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| Polypeptide | RefSeq:NP_956160 |
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| Polypeptide | RefSeq:NP_001315465 |
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| Polypeptide | GenPept:AAI64975 | 186 |
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| Polypeptide | GenPept:AAI55115 | 186 |
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| Polypeptide | GenPept:AAH45338 | 186 |
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| [GENE] tspy (10) | RNA | RefSeq:XM_005167018 | 3653 |
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| RNA | RefSeq:NM_200055 | 3413 |
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| RNA | GenBank:BC057534 | 3413 |
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| RNA | GenBank:GDQQ01016709 | 1788 |
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| Genomic | GenBank:BX544876 | 154624 | ||
| Polypeptide | UniProtKB:Q6PFI8 | 519 |
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| Polypeptide | UniProtKB:A0A8M2BEB9 | 518 |
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| Polypeptide | RefSeq:NP_956349 | 519 |
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| Polypeptide | RefSeq:XP_005167075 | 518 |
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| Polypeptide | GenPept:AAH57534 | 519 |
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