Gene

zgc:152670

ID

ZDB-GENE-060929-954

Name

zgc:152670

Symbol

zgc:152670 Nomenclature History

Previous Names

si:ch211-265g22.3

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Predicted to contribute to procollagen-proline 4-dioxygenase activity. Predicted to be involved in peptidyl-proline hydroxylation to 4-hydroxy-L-proline. Predicted to localize to endoplasmic reticulum. Orthologous to human P4HA3 (prolyl 4-hydroxylase subunit alpha 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zgc:152670 Human Ortholog

No data available

Associated With zgc:152670 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR005123	Oxoglutarate/iron-dependent dioxygenase
Domain	IPR006620	Prolyl 4-hydroxylase, alpha subunit
Domain	IPR013547	Prolyl 4-hydroxylase alpha-subunit, N-terminal
Domain	IPR044862	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain
Family	IPR045054	Prolyl 4-hydroxylase
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily

Domain Details Per Protein

Protein	Length	Oxoglutarate/iron-dependent dioxygenase	Prolyl 4-hydroxylase	Prolyl 4-hydroxylase, alpha subunit	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Prolyl 4-hydroxylase alpha-subunit, N-terminal	Tetratricopeptide-like helical domain superfamily
UniProtKB:A0A8M9QJG6 InterPro	473
UniProtKB:Z4YHZ5 InterPro	490
UniProtKB:Q1RLP2 InterPro	508

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	zgc:152670-201 (1) Ensembl	Havana	2890 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	zgc:152670-203 (1) Ensembl	Havana	2377 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	zgc:152670-002 (1) Ensembl	Havana	493 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	zgc:152670-003 (1) Ensembl	Havana	528 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations