Gene

glyr1

ID

ZDB-GENE-041121-5

Name

glyoxylate reductase 1 homolog (Arabidopsis)

Symbol

glyr1 Nomenclature History

Previous Names

fb96g02
wu:fb96g02
zgc:103629

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have methylated histone binding activity. Predicted to be involved in oxidation-reduction process. Predicted to localize to nucleus. Orthologous to human GLYR1 (glyoxylate reductase 1 homolog).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:6901621 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With glyr1 Human Ortholog

No data available

Associated With glyr1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000313	PWWP domain
Domain	IPR006115	6-phosphogluconate dehydrogenase, NADP-binding
Domain	IPR029154	3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain
Domain	IPR035501	Cytokine-like nuclear factor N-PAC, PWWP domain
Homologous_superfamily	IPR008927	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
Homologous_superfamily	IPR013328	6-phosphogluconate dehydrogenase, domain 2
Homologous_superfamily	IPR036291	NAD(P)-binding domain superfamily

Domain Details Per Protein

Protein	Length	3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain	6-phosphogluconate dehydrogenase, domain 2	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	6-phosphogluconate dehydrogenase, NADP-binding	Cytokine-like nuclear factor N-PAC, PWWP domain	NAD(P)-binding domain superfamily	PWWP domain
UniProtKB:A0A8M2BBK6 InterPro	508
UniProtKB:Q5RKN4 InterPro	462
UniProtKB:A0A8M9PMQ5 InterPro	490
UniProtKB:B2GT29 InterPro	462
UniProtKB:A0A8M2BBE0 InterPro	507

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	glyr1-202 (1) Ensembl	Havana	1080 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	glyr1-203 (1) Ensembl	Havana	3097 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	glyr1-204 (1) Ensembl	Havana	830 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	glyr1-002 (1) Ensembl	Havana	645 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations