Gene

chst10

ID

ZDB-GENE-040808-40

Name

carbohydrate sulfotransferase 10

Symbol

chst10 Nomenclature History

Previous Names

HNK-1ST (1)
zgc:100964

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have sulfotransferase activity. Predicted to be involved in proteoglycan biosynthetic process. Predicted to localize to Golgi membrane and integral component of membrane. Is expressed in intermediate reticular formation; region of the nucleus of the medial longitudinal fascicle; and spinal cord. Orthologous to human CHST10 (carbohydrate sulfotransferase 10).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7143889 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With chst10 Human Ortholog

No data available

Associated With chst10 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR005331	Sulfotransferase
Family	IPR018011	Carbohydrate sulfotransferase 8-10

Domain Details Per Protein

Protein	Length	Carbohydrate sulfotransferase 8-10	Sulfotransferase
UniProtKB:A0A8M2B6P5 InterPro	399
UniProtKB:Q6AXM1 InterPro	365
UniProtKB:A0A8M2B6S7 InterPro	364
UniProtKB:A0A2R8QDC0 InterPro	375
UniProtKB:A0A8M2B6N8 InterPro	398
UniProtKB:A0A8M2B725 InterPro	374

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	chst10-201 (1) Ensembl	Havana	1798 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	chst10-204 (1) Ensembl	Havana	703 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	chst10-205 (1) Ensembl	Havana	814 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	chst10-206 (1) Ensembl	Havana	588 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	chst10-002 (1) Ensembl	Havana	789 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	chst10-003 (1) Ensembl	Havana	753 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations