Gene

polr2d

ID
ZDB-GENE-040714-2
Name
RNA polymerase II subunit D
Symbol
polr2d Nomenclature History
Previous Names
  • rnap
  • wu:fa95b11
  • zgc:110435
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to contribute to DNA-directed 5'-3' RNA polymerase activity; single-stranded DNA binding activity; and single-stranded RNA binding activity. Predicted to be involved in RNA metabolic process; mRNA export from nucleus in response to heat stress; and positive regulation of translational initiation. Predicted to localize to P-body and RNA polymerase II, core complex. Is expressed in several structures, including blastomere; eye; heart; liver; and pleuroperitoneal region. Orthologous to human POLR2D (RNA polymerase II subunit D).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
8 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With polr2d Human Ortholog
No data available
Associated With polr2d Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006590 RNA polymerase Rpb4/RPC9, core
Family IPR005574 RNA polymerase subunit Rpb4/RPC9
Family IPR045222 DNA-directed RNA polymerase II subunit Rpb4-like
Homologous_superfamily IPR010997 HRDC-like superfamily
Homologous_superfamily IPR038324 Rpb4/RPC9 superfamily
Domain Details Per Protein
Protein Length DNA-directed RNA polymerase II subunit Rpb4-like HRDC-like superfamily RNA polymerase Rpb4/RPC9, core RNA polymerase subunit Rpb4/RPC9 Rpb4/RPC9 superfamily
UniProtKB:A0A8M1N062 145
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA polr2d-201 (1) Havana 613 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations