Gene

apba2b

ID

ZDB-GENE-030131-5371

Name

amyloid beta (A4) precursor protein-binding, family A, member 2b

Symbol

apba2b Nomenclature History

Previous Names

apba2
fd15a04
wu:fd15a04

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to have amyloid-beta binding activity. Predicted to be involved in chemical synaptic transmission. Predicted to localize to cytoplasm; dendritic spine; and plasma membrane. Orthologous to human APBA2 (amyloid beta precursor protein binding family A member 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With apba2b Human Ortholog

No data available

Associated With apba2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001478	PDZ domain
Domain	IPR006020	PTB/PI domain
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR036034	PDZ superfamily

Domain Details Per Protein

Protein	Length	PDZ domain	PDZ superfamily	PH-like domain superfamily	PTB/PI domain
UniProtKB:A0A8M2BGT9 InterPro	822
UniProtKB:A0A8M2BG86 InterPro	834
UniProtKB:F1Q9E4 InterPro	821
UniProtKB:A0A1D5NS70 InterPro	833

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	apba2b-202 (1) Ensembl	Havana	644 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	apba2b-204 (1) Ensembl	Havana	755 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	apba2b-205 (1) Ensembl	Havana	4027 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	apba2b-003 (1) Ensembl	Havana	513 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations