Gene

ilf3a

ID

ZDB-GENE-030131-3151

Name

interleukin enhancer binding factor 3a

Symbol

ilf3a Nomenclature History

Previous Names

fc28f07
wu:fc28f07
wu:fi34h10
zgc:113842

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have double-stranded RNA binding activity and single-stranded RNA binding activity. Predicted to localize to nucleus. Orthologous to human ILF3 (interleukin enhancer binding factor 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:113842 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ilf3a Human Ortholog

No data available

Associated With ilf3a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR006561	DZF domain
Domain	IPR014720	Double-stranded RNA-binding domain
Domain	IPR049401	DZF domain, N-terminal
Domain	IPR049402	DZF domain, C-terminal
Homologous_superfamily	IPR043519	Nucleotidyltransferase superfamily

Domain Details Per Protein

Protein	Length	Double-stranded RNA-binding domain	DZF domain	DZF domain, C-terminal	DZF domain, N-terminal	Nucleotidyltransferase superfamily
UniProtKB:A0A8M2BD00 InterPro	819
UniProtKB:F1QZW7 InterPro	820
UniProtKB:Q4V9C6 InterPro	820

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ilf3a-202 (1) Ensembl	Havana	3200 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ilf3a-204 (1) Ensembl	Havana	624 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ilf3a-002 (1) Ensembl	Havana	940 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ilf3a-003 (1) Ensembl	Havana	774 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ilf3a-004 (1) Ensembl	Havana	736 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ilf3a-005 (1) Ensembl	Havana	945 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ilf3a-007 (1) Ensembl	Havana	755 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations