Gene

atp1a1a.1

ID

ZDB-GENE-001212-1

Name

ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1

Symbol

atp1a1a.1 Nomenclature History

Previous Names

atp1a1
atp[a]1B1 (1)
cb70 (1)
had (1)
hip (1)
hiphop (1)
snk (1)
heart and mind (1)
snakehead (1)
wu:fa03c03
wu:fb92h10 (1)

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Exhibits sodium:potassium-exchanging ATPase activity. Involved in several processes, including animal organ development; embryonic body morphogenesis; and regulation of heart rate. Predicted to localize to integral component of membrane. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2DD. Is expressed in several structures, including cardiovascular system; immature eye; mesoderm; nervous system; and pronephros. Orthologous to human ATP1A1 (ATPase Na+/K+ transporting subunit alpha 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

31 figures from 14 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

cb70 (22 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 40 figures from 13 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atp1a1a.1 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
Charcot-Marie-Tooth disease type 2DD	Alliance	Charcot-Marie-Tooth disease, axonal, type 2DD	618036
		Hypomagnesemia, seizures, and impaired intellectual development 2	618314

Associated With atp1a1a.1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR004014	Cation-transporting P-type ATPase, N-terminal
Domain	IPR006068	Cation-transporting P-type ATPase, C-terminal
Domain	IPR044492	P-type ATPase, haloacid dehalogenase domain
Family	IPR001757	P-type ATPase
Family	IPR005775	P-type ATPase subfamily IIC, subunit alpha
Homologous_superfamily	IPR008250	P-type ATPase, A domain superfamily
Homologous_superfamily	IPR023214	HAD superfamily
Homologous_superfamily	IPR023298	P-type ATPase, transmembrane domain superfamily
Homologous_superfamily	IPR023299	P-type ATPase, cytoplasmic domain N
Homologous_superfamily	IPR036412	HAD-like superfamily
PTM	IPR018303	P-type ATPase, phosphorylation site

Domain Details Per Protein

Protein	Length	Cation-transporting P-type ATPase, C-terminal	Cation-transporting P-type ATPase, N-terminal	HAD-like superfamily	HAD superfamily	P-type ATPase	P-type ATPase, A domain superfamily	P-type ATPase, cytoplasmic domain N	P-type ATPase, haloacid dehalogenase domain	P-type ATPase, phosphorylation site	P-type ATPase subfamily IIC, subunit alpha	P-type ATPase, transmembrane domain superfamily
UniProtKB:Q9DGL6 InterPro	1028

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atp1a1a.1-201 (1) Ensembl	Havana	3506 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	atp1a1a.1-002 (1) Ensembl	Havana	867 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	atp1a1a.1-003 (1) Ensembl	Havana	416 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	atp1a1a.1-004 (1) Ensembl	Havana	313 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	atp1a1a.1-005 (1) Ensembl	Havana	652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	atp1a1a.1-006 (1) Ensembl	Havana	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab3-atp1a1	polyclonal	atp1a1a.1		Rabbit	IHC		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations