ZFIN

ZFIN ID: ZDB-TGCONSTRCT-110413-4

ZFIN ID: ZDB-TGCONSTRCT-110413-4

CITATIONS (61 total)

Transgenic Construct Name:	TgBAC(slc17a6b:LOXP-DsRed-LOXP-GFP)
Transgenic Construct Symbol:	TgBAC(slc17a6b:LOXP-DsRed-LOXP-GFP)

Collier, A.D., Yasmin, N., Karatayev, O., Abdulai, A.R., Yu, B., Khalizova, N., Fam, M., Leibowitz, S.F. (2023) Neuronal chemokine concentration gradients mediate effects of embryonic ethanol exposure on ectopic hypocretin/orexin neurons and behavior in zebrafish. Scientific Reports. 13:14471447

Bhandiwad, A.A., Chu, N.C., Semenova, S.A., Holmes, G.A., Burgess, H.A. (2022) A cerebellar-prepontine circuit for tonic immobility triggered by an inescapable threat. Science advances. 8:eabo0549

Blanc, M., Dalmasso, G., Udina, F., Pujades, C. (2022) A dynamic and expandable Digital 3D-Atlas MAKER for monitoring the temporal changes in tissue growth during hindbrain morphogenesis. eLIFE. 11:

Böhm, U.L., Kimura, Y., Kawashima, T., Ahrens, M.B., Higashijima, S.I., Engert, F., Cohen, A.E. (2022) Voltage imaging identifies spinal circuits that modulate locomotor adaptation in zebrafish. Neuron. 110(7):1211-1222.e4

Chen, Z., Long, H., Guo, J., Wang, Y., He, K., Tao, C., Li, X., Jiang, K., Guo, S., Pi, Y. (2022) Autism-Risk Gene necab2 Regulates Psychomotor and Social Behavior as a Neuronal Modulator of mGluR1 Signaling. Frontiers in molecular neuroscience. 15:901682

Collier, A.D., Yasmin, N., Chang, G.Q., Karatayev, O., Khalizova, N., Fam, M., Abdulai, A.R., Yu, B., Leibowitz, S.F. (2022) Embryonic ethanol exposure induces ectopic Hcrt and MCH neurons outside hypothalamus in rats and zebrafish: Role in ethanol-induced behavioural disturbances. Addiction biology. 27:e13238

De Meulemeester, A.S., Heylen, L., Siekierska, A., Mills, J.D., Romagnolo, A., Van Der Wel, N.N., Aronica, E., de Witte, P.A.M. (2022) Hyperactivation of mTORC1 in a double hit mutant zebrafish model of tuberous sclerosis complex causes increased seizure susceptibility and neurodevelopmental abnormalities. Frontiers in cell and developmental biology. 10:952832

Hevia, C.F., Engel-Pizcueta, C., Udina, F., Pujades, C. (2022) The neurogenic fate of the hindbrain boundaries relies on Notch3-dependent asymmetric cell divisions. Cell Reports. 39:110915

Niemeyer, J.E., Gadamsetty, P., Chun, C., Sylvester, S., Lucas, J.P., Ma, H., Schwartz, T.H., Aksay, E.R.F. (2022) Seizures initiate in zones of relative hyperexcitation in a zebrafish epilepsy model. Brain : a journal of neurology. 145(7):2347-2360

Picton, L.D., Björnfors, E.R., Fontanel, P., Pallucchi, I., Bertuzzi, M., El Manira, A. (2022) Developmental switch in the function of inhibitory commissural V0d interneurons in zebrafish. Current biology : CB. 32(16):3515-3528.e4

Robens, B.K., Yang, X., McGraw, C.M., Turner, L.H., Robens, C., Thyme, S., Rotenberg, A., Poduri, A. (2022) Mosaic and non-mosaic protocadherin 19 mutation leads to neuronal hyperexcitability in zebrafish. Neurobiology of disease. 169:105738

Tesmer, A.L., Fields, N.P., Robles, E. (2022) Input from torus longitudinalis drives binocularity and spatial summation in zebrafish optic tectum. BMC Biology. 20:24

DeMarco, E., Tesmer, A.L., Hech, B., Kawakami, K., Robles, E. (2021) Pyramidal Neurons of the Zebrafish Tectum Receive Highly Convergent Input From Torus Longitudinalis. Frontiers in Neuroanatomy. 15:636683

Geng, Y., Peterson, R.T. (2021) Rapid Mounting of Zebrafish Larvae for Brain Imaging. Zebrafish. 18:376-379

Golan, M., Boulanger-Weill, J., Pinot, A., Fontanaud, P., Faucherre, A., Gajbhiye, D.S., Hollander-Cohen, L., Fiordelisio-Coll, T., Martin, A.O., Mollard, P. (2021) Synaptic communication mediates the assembly of a self-organizing circuit that controls reproduction. Science advances. 7(8):

Heylen, L., Pham, D.H., De Meulemeester, A.S., Samarut, É., Skiba, A., Copmans, D., Kazwiny, Y., Vanden Berghe, P., de Witte, P.A.M., Siekierska, A. (2021) Pericardial Injection of Kainic Acid Induces a Chronic Epileptic State in Larval Zebrafish. Frontiers in molecular neuroscience. 14:753936

Kler, S., Ma, M., Narayan, S., Ahrens, M.B., Pan, Y.A. (2021) Cre-Dependent Anterograde Transsynaptic Labeling and Functional Imaging in Zebrafish Using VSV With Reduced Cytotoxicity. Frontiers in Neuroanatomy. 15:758350

Picton, L.D., Bertuzzi, M., Pallucchi, I., Fontanel, P., Dahlberg, E., Björnfors, E.R., Iacoviello, F., Shearing, P.R., El Manira, A. (2021) A spinal organ of proprioception for integrated motor action feedback. Neuron. 109(7):1188-1201.e7

Prentzell, M.T., Rehbein, U., Cadena Sandoval, M., De Meulemeester, A.S., Baumeister, R., Brohée, L., Berdel, B., Bockwoldt, M., Carroll, B., Chowdhury, S.R., von Deimling, A., Demetriades, C., Figlia, G., Genomics England Research Consortium, de Araujo, M.E.G., Heberle, A.M., Heiland, I., Holzwarth, B., Huber, L.A., Jaworski, J., Kedra, M., Kern, K., Kopach, A., Korolchuk, V.I., van 't Land-Kuper, I., Macias, M., Nellist, M., Palm, W., Pusch, S., Ramos Pittol, J.M., Reil, M., Reintjes, A., Reuter, F., Sampson, J.R., Scheldeman, C., Siekierska, A., Stefan, E., Teleman, A.A., Thomas, L.E., Torres-Quesada, O., Trump, S., West, H.D., de Witte, P., Woltering, S., Yordanov, T.E., Zmorzynska, J., Opitz, C.A., Thedieck, K. (2021) G3BPs tether the TSC complex to lysosomes and suppress mTORC1 signaling. Cell. 184(3):655-674.e27

Zhang, H., Wang Haifang, H., Shen, X., Jia, X., Yu, S., Qiu, X., Wang, Y., Du, J., Yan, J., He, J. (2021) The landscape of regulatory genes in brain-wide neuronal phenotypes of a vertebrate brain. eLIFE. 10:

Chow, D.M., Sinefeld, D., Kolkman, K.E., Ouzounov, D.G., Akbari, N., Tatarsky, R., Bass, A., Xu, C., Fetcho, J.R. (2020) Deep three-photon imaging of the brain in intact adult zebrafish. Nature Methods. 17(6):605-608

Fernandes, A.M., Mearns, D.S., Donovan, J.C., Larsch, J., Helmbrecht, T.O., Kölsch, Y., Laurell, E., Kawakami, K., Dal Maschio, M., Baier, H. (2020) Neural circuitry for stimulus selection in the zebrafish visual system. Neuron. 109(5):805-822.e6

Andalman, A.S., Burns, V.M., Lovett-Barron, M., Broxton, M., Poole, B., Yang, S.J., Grosenick, L., Lerner, T.N., Chen, R., Benster, T., Mourrain, P., Levoy, M., Rajan, K., Deisseroth, K. (2019) Neuronal Dynamics Regulating Brain and Behavioral State Transitions. Cell. 177(4):970-985.e20

Antinucci, P., Folgueira, M., Bianco, I.H. (2019) Pretectal neurons control hunting behaviour. eLIFE. 8:

Brenet, A., Hassan-Abdi, R., Somkhit, J., Yanicostas, C., Soussi-Yanicostas, N. (2019) Defective Excitatory/Inhibitory Synaptic Balance and Increased Neuron Apoptosis in a Zebrafish Model of Dravet Syndrome. Cells. 8(10):

James, D.M., Kozol, R.A., Kajiwara, Y., Wahl, A.L., Storrs, E.C., Buxbaum, J.D., Klein, M., Moshiree, B., Dallman, J.E. (2019) Intestinal dysmotility in a zebrafish (Danio rerio) shank3a;shank3b mutant model of autism. Molecular autism. 10:3

Kunst, M., Laurell, E., Mokayes, N., Kramer, A., Kubo, F., Fernandes, A.M., Förster, D., Dal Maschio, M., Baier, H. (2019) A Cellular-Resolution Atlas of the Larval Zebrafish Brain. Neuron. 103(1):21-38.e5

Pedroni, A., Ampatzis, K. (2019) Large-Scale Analysis of the Diversity and Complexity of the Adult Spinal Cord Neurotransmitter Typology. iScience. 19:1189-1201

Pujala, A., Koyama, M. (2019) Chronology-based architecture of descending circuits that underlie the development of locomotor repertoire after birth. eLIFE. 8:

Tabor, K.M., Marquart, G.D., Hurt, C., Smith, T.S., Geoca, A.K., Bhandiwad, A.A., Subedi, A., Sinclair, J.L., Rose, H.M., Polys, N.F., Burgess, H.A. (2019) Brain-wide cellular resolution imaging of Cre transgenic zebrafish lines for functional circuit-mapping. eLIFE. 8

Farrar, M.J., Kolkman, K.E., Fetcho, J.R. (2018) Features of the structure, development and activity of the Zebrafish Noradrenergic System explored in new CRISPR transgenic lines. The Journal of comparative neurology. 526(15):2493-2508

Gupta, T., Marquart, G.D., Horstick, E.J., Tabor, K.M., Pajevic, S., Burgess, H.A. (2018) Morphometric analysis and neuroanatomical mapping of the zebrafish brain. Methods (San Diego, Calif.). 150:49-62

Severi, K.E., Böhm, U.L., Wyart, C. (2018) Investigation of hindbrain activity during active locomotion reveals inhibitory neurons involved in sensorimotor processing. Scientific Reports. 8:13615

Boulanger-Weill, J., Candat, V., Jouary, A., Romano, S., Pérez-Schuster, V., Sumbre, G. (2017) Functional Interactions between Newborn and Mature Neurons Leading to Integration into Established Neuronal Circuits. Current biology : CB. 27(12):1707-1720.e5

Djenoune, L., Desban, L., Gomez, J., Sternberg, J.R., Prendergast, A., Langui, D., Quan, F.B., Marnas, H., Auer, T.O., Rio, J.P., Del Bene, F., Bardet, P.L., Wyart, C. (2017) The dual developmental origin of spinal cerebrospinal fluid-contacting neurons gives rise to distinct functional subtypes. Scientific Reports. 7:719

Horstick, E.J., Bayleyen, Y., Sinclair, J.L., Burgess, H.A. (2017) Search strategy is regulated by somatostatin signaling and deep brain photoreceptors in zebrafish. BMC Biology. 15:4

Marquart, G.D., Tabor, K.M., Horstick, E.J., Brown, M., Geoca, A.K., Polys, N.F., Nogare, D.D., Burgess, H.A. (2017) High-precision registration between zebrafish brain atlases using symmetric diffeomorphic normalization. GigaScience. 6:1-15

Björnfors, E.R., El Manira, A. (2016) Functional diversity of excitatory commissural interneurons in adult zebrafish. eLIFE. 5

Chou, M.Y., Amo, R., Kinoshita, M., Cherng, B.W., Shimazaki, H., Agetsuma, M., Shiraki, T., Aoki, T., Takahoko, M., Yamazaki, M., Higashijima, S., Okamoto, H. (2016) Social conflict resolution regulated by two dorsal habenular subregions in zebrafish. Science (New York, N.Y.). 352:87-90

Dunn, T.W., Mu, Y., Narayan, S., Randlett, O., Naumann, E.A., Yang, C.T., Schier, A.F., Freeman, J., Engert, F., Ahrens, M.B. (2016) Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion. eLIFE. 5:e12741

Hilinski, W.C., Bostrom, J.R., England, S.J., Juárez-Morales, J.L., de Jager, S., Armant, O., Legradi, J., Strähle, U., Link, B.A., Lewis, K.E. (2016) Lmx1b is required for the glutamatergic fates of a subset of spinal cord neurons. Neural Development. 11:16

Hoffman, E.J., Turner, K.J., Fernandez, J.M., Cifuentes, D., Ghosh, M., Ijaz, S., Jain, R.A., Kubo, F., Bill, B.R., Baier, H., Granato, M., Barresi, M.J., Wilson, S.W., Rihel, J., State, M.W., Giraldez, A.J. (2016) Estrogens Suppress a Behavioral Phenotype in Zebrafish Mutants of the Autism Risk Gene, CNTNAP2. Neuron. 89(4):725-33

Koyama, M., Minale, F., Shum, J., Nishimura, N., Schaffer, C.B., Fetcho, J.R. (2016) A circuit motif in the zebrafish hindbrain for a two alternative behavioral choice to turn left or right. eLIFE. 5

Song, J., Ampatzis, K., Björnfors, E.R., El Manira, A. (2016) Motor neurons control locomotor circuit function retrogradely via gap junctions. Nature. 529(7586):399-402

Sternberg, J.R., Severi, K.E., Fidelin, K., Gomez, J., Ihara, H., Alcheikh, Y., Hubbard, J.M., Kawakami, K., Suster, M., Wyart, C. (2016) Optimization of a Neurotoxin to Investigate the Contribution of Excitatory Interneurons to Speed Modulation In Vivo. Current biology : CB. 26(17):2319-28

Barker, A.J., Baier, H. (2015) Sensorimotor Decision Making in the Zebrafish Tectum. Current biology : CB. 25:2804-14

Bergeron, S.A., Carrier, N., Li, G.H., Ahn, S., Burgess, H.A. (2015) Gsx1 expression defines neurons required for prepulse inhibition. Molecular psychiatry. 20(8):974-85

Fidelin, K., Djenoune, L., Stokes, C., Prendergast, A., Gomez, J., Baradel, A., Del Bene, F., Wyart, C. (2015) State-Dependent Modulation of Locomotion by GABAergic Spinal Sensory Neurons. Current biology : CB. 25:3035-47

Kozol, R.A., Cukier, H.N., Zou, B., Mayo, V., De Rubeis, S., Cai, G., Griswold, A.J., Whitehead, P.L., Haines, J.L., Gilbert, J.R., Cuccaro, M.L., Martin, E.R., Baker, J.D., Buxbaum, J.D., Pericak-Vance, M.A., Dallman, J.E. (2015) Two knockdown models of the autism genes SYNGAP1 and SHANK3 in zebrafish produce similar behavioral phenotypes associated with embryonic disruptions of brain morphogenesis. Human molecular genetics. 24(14):4006-23

Marquart, G.D., Tabor, K.M., Brown, M., Strykowski, J.L., Varshney, G.K., LaFave, M.C., Mueller, T., Burgess, S.M., Higashijima, S., Burgess, H.A. (2015) A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies. Frontiers in neural circuits. 9:78

Amo, R., Fredes, F., Kinoshita, M., Aoki, R., Aizawa, H., Agetsuma, M., Aoki, T., Shiraki, T., Kakinuma, H., Matsuda, M., Yamazaki, M., Takahoko, M., Tsuboi, T., Higashijima, S.I., Miyasaka, N., Koide, T., Yabuki, Y., Yoshihara, Y., Fukai, T., Okamoto, H. (2014) The Habenulo-Raphe Serotonergic Circuit Encodes an Aversive Expectation Value Essential for Adaptive Active Avoidance of Danger. Neuron. 84:1034-1048

Kubo, F., Hablitzel, B., Dal Maschio, M., Driever, W., Baier, H., Arrenberg, A.B. (2014) Functional architecture of an optic flow-responsive area that drives horizontal eye movements in zebrafish. Neuron. 81:1344-59

Satou, C., Kimura, Y., Hirata, H., Suster, M.L., Kawakami, K., and Higashijima, S. (2013) Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons. Development (Cambridge, England). 140(18):3927-3931

Asakawa, K., Higashijima, S.I., and Kawakami, K. (2012) An mnr2b/hlxb9lb enhancer trap line that labels spinal and abducens motor neurons in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 241(2):327-332

Gabriel, J.P., Trivedi, C.A., Maurer, C.M., Ryu, S., and Bollmann, J.H. (2012) Layer-specific targeting of direction-selective neurons in the zebrafish optic tectum. Neuron. 76(6):1147-1160

Satou, C., Kimura, Y., and Higashijima, S. (2012) Generation of multiple classes of v0 neurons in zebrafish spinal cord: progenitor heterogeneity and temporal control of neuronal diversity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 32(5):1771-1783

Schärer, Y.P., Shum, J., Moressis, A., and Friedrich, R.W. (2012) Dopaminergic modulation of synaptic transmission and neuronal activity patterns in the zebrafish homolog of olfactory cortex. Frontiers in neural circuits. 6:76

Kinkhabwala, A., Riley, M., Koyama, M., Monen, J., Satou, C., Kimura, Y., Higashijima, S.I., and Fetcho, J. (2011) A structural and functional ground plan for neurons in the hindbrain of zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 108(3):1164-1169

Koyama, M., Kinkhabwala, A., Satou, C., Higashijima, S.I., and Fetcho, J. (2011) Mapping a sensory-motor network onto a structural and functional ground plan in the hindbrain. Proceedings of the National Academy of Sciences of the United States of America. 108(3):1170-1175

Additional Citations (2):

ZFIN Staff (2015) Data Model Change: Sequence Targeting Reagents Removed from Environment. ZFIN Historical Data.

Zebrafish Nomenclature Committee (2003) Nomenclature Data Curation (2003-2010). Nomenclature Committee Submission.