Chatzopoulou, A., Schoonheim, P.J., Torraca, V., Meijer, A.H., Spaink, H.P., Schaaf, M.J. (2017) Functional analysis reveals no transcriptional role for the glucocorticoid receptor β-isoform in zebrafish. Molecular and Cellular Endocrinology. 447:61-70

Dinarello, A., Tesoriere, A., Martini, P., Fontana, C.M., Volpato, D., Badenetti, L., Terrin, F., Facchinello, N., Romualdi, C., Carnevali, O., Dalla Valle, L., Argenton, F. (2022) Zebrafish Mutant Lines Reveal the Interplay between nr3c1 and nr3c2 in the GC-Dependent Regulation of Gene Transcription. International Journal of Molecular Sciences. 23(5):

Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549

Foulkes, M.J., Henry, K.M., Rougeot, J., Hooper-Greenhill, E., Loynes, C.A., Jeffrey, P., Fleming, A., Savage, C.O., Meijer, A.H., Jones, S., Renshaw, S.A. (2017) Expression and regulation of drug transporters in vertebrate neutrophils. Scientific Reports. 7:4967

Garcia-Reyero, N., Escalon, L., Prats, E., Faria, M., Soares, A.M., Raldúa, D. (2016) Targeted Gene Expression in Zebrafish Exposed to Chlorpyrifos-Oxon Confirms Phenotype-Specific Mechanisms Leading to Adverse Outcomes. Bulletin of environmental contamination and toxicology. 96(6):707-713

Her, G.M., Hsu, C.C., Hong, J.R., Lai, C.Y., Hsu, M.C., Pang, H.W., Chan, S.K., and Pai, W.Y. (2011) Overexpression of gankyrin induces liver steatosis in zebrafish (Danio rerio). Biochimica et biophysica acta. Molecular and cell biology of lipids. 1811(9):536-48

Jastroch, M., Wuertz, S., Kloas, W., and Klingenspor, M. (2005) Uncoupling protein 1 in fish uncovers an ancient evolutionary history of mammalian nonshivering thermogenesis. Physiological Genomics. 22(2):150-156

Jiang, J., Shi, Y., Yu, R., Chen, L., Zhao, X. (2018) Biological response of zebrafish after short-term exposure to azoxystrobin. Chemosphere. 202:56-64

Jin, Y., Zhang, X., Shu, L., Chen, L., Sun, L., Qian, H., Liu, W., and Fu, Z. (2010) Oxidative stress response and gene expression with atrazine exposure in adult female zebrafish (Danio rerio). Chemosphere. 78(7):846-852

Li, H., Cao, F., Zhao, F., Yang, Y., Teng, M., Wang, C., Qiu, L. (2018) Developmental toxicity, oxidative stress and immunotoxicity induced by three strobilurins (pyraclostrobin, trifloxystrobin and picoxystrobin) in zebrafish embryos. Chemosphere. 207:781-790

Liu, Y., Wang, J., Wei, Y., Zhang, H., Xu, M., and Dai, J. (2008) Induction of time-dependent oxidative stress and related transcriptional effects of perfluorododecanoic acid in zebrafish liver. Aquatic toxicology (Amsterdam, Netherlands). 89(4):242-250

Lu, J.W., Yang, W.Y., Tsai, S.M., Lin, Y.M., Chang, P.H., Chen, J.R., Wang, H.D., Wu, J.L., Jin, S.L., and Yuh, C.H. (2013) Liver-Specific Expressions of HBx and src in the p53 Mutant Trigger Hepatocarcinogenesis in Zebrafish. PLoS One. 8(10):e76951

Mahjoubian, M., Naeemi, A.S., Sheykhan, M. (2021) Toxicological effects of Ag₂O and Ag₂CO₃ doped TiO₂ nanoparticles and pure TiO₂ particles on zebrafish (Danio rerio). Chemosphere. 263:128182

Morgan, R., Andreassen, A.H., Åsheim, E.R., Finnøen, M.H., Dresler, G., Brembu, T., Loh, A., Miest, J.J., Jutfelt, F. (2022) Reduced physiological plasticity in a fish adapted to stable temperatures. Proceedings of the National Academy of Sciences of the United States of America. 119:e2201919119

Mukhopadhyay, D., Chattopadhyay, A. (2014) Induction of Oxidative Stress and Related Transcriptional Effects of Sodium Fluoride in Female Zebrafish Liver. Bulletin of environmental contamination and toxicology. 93(1):64-70

Ran, C., Xie, M., Li, J., Xie, Y., Ding, Q., Li, Y., Zhou, W., Yang, Y., Zhang, Z., Olsen, R.E., Zhou, Z. (2021) Dietary Nucleotides Alleviate Hepatic Lipid Deposition via Exogenous AMP-Mediated AMPK Activation in Zebrafish. The Journal of nutrition. 151(10):2986-2996

Saito, S., Saito, C.T., and Shingai, R. (2008) Adaptive evolution of the uncoupling protein 1 gene contributed to the acquisition of novel nonshivering thermogenesis in ancestral eutherian mammals. Gene. 408(1-2):37-44

Sarkar, S., Mukherjee, S., Chattopadhyay, A., Bhattacharya, S. (2017) Differential modulation of cellular antioxidant status in zebrafish liver and kidney exposed to low dose arsenic trioxide. Ecotoxicology and environmental safety. 135:173-182

Shaw, P., Mondal, P., Bandyopadhyay, A., Chattopadhyay, A. (2018) Environmentally relevant concentration of chromium activates Nrf2 and alters transcription of related XME genes in liver of zebrafish. Chemosphere. 214:35-46

Si, J., Zhang, H., Wang, Z., Wu, Z., Lu, J., Di, C., Zhou, X., and Wang, X. (2013) Effects of 12C6+ ion radiation and ferulic acid on the zebrafish (Danio rerio) embryonic oxidative stress response and gene expression. Mutation research. 745-746:26-33

Stancová, V., Ziková, A., Svobodová, Z., Kloas, W. (2015) Effects of the non-steroidal anti-inflammatory drug(NSAID) naproxen on gene expression of antioxidant enzymes in zebrafish (Danio rerio). Environmental Toxicology and Pharmacology. 40:343-348

Stuart, J.A., Cadenas, S., Jekabsons, M.B., Roussel, D., and Brand, M.D. (2001) Mitochondrial proton leak and the uncoupling protein 1 homologues. Biochim. Biophys. Acta Bio-Energetics. 1504(1):144-158

Tseng, Y.C., Chen, R.D., Lucassen, M., Schmidt, M.M., Dringen, R., Abele, D., and Hwang, P.P. (2011) Exploring Uncoupling Proteins and Antioxidant Mechanisms under Acute Cold Exposure in Brains of Fish. PLoS One. 6(3):e18180

Wang, G., Kang, N., Gong, H., Luo, Y., Bai, C., Chen, Y., Ji, X., Huang, C., Dong, Q. (2015) Upregulation of uncoupling protein Ucp2 through acute cold exposure increases post-thaw sperm quality in zebrafish. Cryobiology. 71(3):464-71

Wang, X., Sun, S., Cao, X., Gao, J. (2020) Quantitative Phosphoproteomic Analysis Reveals the Regulatory Networks of Elovl6 on Lipid and Glucose Metabolism in Zebrafish. International Journal of Molecular Sciences. 21(8):

Xie, M., Hao, Q., Xia, R., Olsen, R.E., Ringø, E., Yang, Y., Zhang, Z., Ran, C., Zhou, Z. (2022) Nuclease-Treated Stabilized Fermentation Product of Cetobacterium somerae Improves Growth, Non-specific Immunity, and Liver Health of Zebrafish (Danio rerio). Frontiers in nutrition. 9:918327

Zhang, F.L., Yang, Y.L., Zhang, Z., Yao, Y.Y., Xia, R., Gao, C.C., Du, D.D., Hu, J., Ran, C., Liu, Z., Zhou, Z.G. (2021) Surface-Displayed Amuc_1100 From Akkermansia muciniphila on Lactococcus lactis ZHY1 Improves Hepatic Steatosis and Intestinal Health in High-Fat-Fed Zebrafish. Frontiers in nutrition. 8:726108

Zhang, Z., Ran, C., Ding, Q.W., Liu, H.L., Xie, M.X., Yang, Y.L., Xie, Y.D., Gao, C.C., Zhang, H.L., Zhou, Z.G. (2019) Ability of prebiotic polysaccharides to activate a HIF1α-antimicrobial peptide axis determines liver injury risk in zebrafish. Communications biology. 2:274

Zhao, X., Wang, S., Wu, Y., You, H., and Lv, L. (2013) Acute ZnO nanoparticles exposure induces developmental toxicity, oxidative stress and DNA damage in embryo-larval zebrafish. Aquatic toxicology (Amsterdam, Netherlands). 136-137:49-59

Dinarello, A., Tesoriere, A., Martini, P., Fontana, C.M., Volpato, D., Badenetti, L., Terrin, F., Facchinello, N., Romualdi, C., Carnevali, O., Dalla Valle, L., Argenton, F. (2022) Zebrafish Mutant Lines Reveal the Interplay between nr3c1 and nr3c2 in the GC-Dependent Regulation of Gene Transcription. International Journal of Molecular Sciences. 23(5):

Xie, M., Hao, Q., Xia, R., Olsen, R.E., Ringø, E., Yang, Y., Zhang, Z., Ran, C., Zhou, Z. (2022) Nuclease-Treated Stabilized Fermentation Product of Cetobacterium somerae Improves Growth, Non-specific Immunity, and Liver Health of Zebrafish (Danio rerio). Frontiers in nutrition. 9:918327

Mahjoubian, M., Naeemi, A.S., Sheykhan, M. (2021) Toxicological effects of Ag₂O and Ag₂CO₃ doped TiO₂ nanoparticles and pure TiO₂ particles on zebrafish (Danio rerio). Chemosphere. 263:128182

Singh, M.K., Jayarajan, R., Varshney, S., Upadrasta, S., Singh, A., Yadav, R., Scaria, V., Sengupta, S., Shanmugam, D., Shalimar, ., Sivasubbu, S., Gandotra, S., Sachidanandan, C. (2021) Chronic systemic exposure to IL6 leads to deregulation of glycolysis and fat accumulation in the zebrafish liver. Biochimica et biophysica acta. Molecular and cell biology of lipids. 1866(5):158905

Zhang, F.L., Yang, Y.L., Zhang, Z., Yao, Y.Y., Xia, R., Gao, C.C., Du, D.D., Hu, J., Ran, C., Liu, Z., Zhou, Z.G. (2021) Surface-Displayed Amuc_1100 From Akkermansia muciniphila on Lactococcus lactis ZHY1 Improves Hepatic Steatosis and Intestinal Health in High-Fat-Fed Zebrafish. Frontiers in nutrition. 8:726108

Mi, X., Li, Z., Yan, J., Li, Y., Zheng, J., Zhaung, Z., Yang, W., Gong, L., Shi, J. (2020) Activation of HIF-1 signaling ameliorates liver steatosis in zebrafish atp7b deficiency (Wilson's disease) models. Biochimica et biophysica acta. Molecular basis of disease. 1866(10):165842

Pradhan, A., Bereketoglu, C., Martin, L., Duhagon, J., Olsson, P.E. (2019) The food preservative ethoxyquin impairs zebrafish development, behavior and alters gene expression profile. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 135:110926

Tu, W., Mart Iacute Nez L Oacute Pez, R.E.N.F., Navarro-Martin, L., Kostyniuk, D.J., Hum, C., Huang, J., Deng, M., Jin, Y., Chan, H.M., Mennigen, J. (2019) Bioconcentration and metabolic effects of emerging PFOS alternatives in developing zebrafish. Environmental science & technology. 53(22):13427-13439

Zhang, Z., Ran, C., Ding, Q.W., Liu, H.L., Xie, M.X., Yang, Y.L., Xie, Y.D., Gao, C.C., Zhang, H.L., Zhou, Z.G. (2019) Ability of prebiotic polysaccharides to activate a HIF1α-antimicrobial peptide axis determines liver injury risk in zebrafish. Communications biology. 2:274

Deng, S., Jia, P.P., Zhang, J.H., Junaid, M., Niu, A., Ma, Y.B., Fu, A., Pei, D.S. (2018) Transcriptomic response and perturbation of toxicity pathways in zebrafish larvae after exposure to graphene quantum dots (GQDs). Journal of hazardous materials. 357:146-158

Jiang, J., Shi, Y., Yu, R., Chen, L., Zhao, X. (2018) Biological response of zebrafish after short-term exposure to azoxystrobin. Chemosphere. 202:56-64

Shaw, P., Mondal, P., Bandyopadhyay, A., Chattopadhyay, A. (2018) Environmentally relevant concentration of chromium activates Nrf2 and alters transcription of related XME genes in liver of zebrafish. Chemosphere. 214:35-46

Wu, S., Li, X., Liu, X., Yang, G., An, X., Wang, Q., Wang, Y. (2018) Joint toxic effects of triazophos and imidacloprid on zebrafish (Danio rerio). Environmental pollution (Barking, Essex : 1987). 235:470-481

Fei, F., Sun, S.Y., Yao, Y.X., Wang, X. (2017) [Generation and phenotype analysis of zebrafish mutations of obesity-related genes lepr and mc4r]. Sheng li xue bao : [Acta physiologica Sinica]. 69:61-69

Sarkar, S., Mukherjee, S., Chattopadhyay, A., Bhattacharya, S. (2017) Differential modulation of cellular antioxidant status in zebrafish liver and kidney exposed to low dose arsenic trioxide. Ecotoxicology and environmental safety. 135:173-182

Garcia-Reyero, N., Escalon, L., Prats, E., Faria, M., Soares, A.M., Raldúa, D. (2016) Targeted Gene Expression in Zebrafish Exposed to Chlorpyrifos-Oxon Confirms Phenotype-Specific Mechanisms Leading to Adverse Outcomes. Bulletin of environmental contamination and toxicology. 96(6):707-713

Liu, H., Sheng, N., Zhang, W., Dai, J. (2015) Toxic effects of perfluorononanoic acid on the development of Zebrafish (Danio rerio) embryos. Journal of environmental sciences (China). 32:26-34

Stancová, V., Ziková, A., Svobodová, Z., Kloas, W. (2015) Effects of the non-steroidal anti-inflammatory drug(NSAID) naproxen on gene expression of antioxidant enzymes in zebrafish (Danio rerio). Environmental Toxicology and Pharmacology. 40:343-348

Zheng, X., Dai, W., Chen, X., Wang, K., Zhang, W., Liu, L., Hou, J. (2015) Caffeine reduces hepatic lipid accumulation through regulation of lipogenesis and ER stress in zebrafish larvae. Journal of Biomedical Science. 22:105

Sarkar, S., Mukherjee, S., Chattopadhyay, A., Bhattacharya, S. (2014) Low dose of arsenic trioxide triggers oxidative stress in zebrafish brain: Expression of antioxidant genes. Ecotoxicology and environmental safety. 107C:1-8

Lu, J.W., Yang, W.Y., Lin, Y.M., Jin, S.L., and Yuh, C.H. (2013) Hepatitis B virus X antigen and aflatoxin B1 synergistically cause hepatitis, steatosis and liver hyperplasia in transgenic zebrafish. Acta histochemica. 115(7):728-39

Si, J., Zhang, H., Wang, Z., Wu, Z., Lu, J., Di, C., Zhou, X., and Wang, X. (2013) Effects of 12C6+ ion radiation and ferulic acid on the zebrafish (Danio rerio) embryonic oxidative stress response and gene expression. Mutation research. 745-746:26-33

Sagi, D., and Kim, S.K. (2012) An Engineering Approach to Extending Lifespan in C. elegans. PLoS Genetics. 8(6):e1002780

Tseng, Y.C., Chen, R.D., Lucassen, M., Schmidt, M.M., Dringen, R., Abele, D., and Hwang, P.P. (2011) Exploring Uncoupling Proteins and Antioxidant Mechanisms under Acute Cold Exposure in Brains of Fish. PLoS One. 6(3):e18180

Jin, Y., Zhang, X., Shu, L., Chen, L., Sun, L., Qian, H., Liu, W., and Fu, Z. (2010) Oxidative stress response and gene expression with atrazine exposure in adult female zebrafish (Danio rerio). Chemosphere. 78(7):846-852

Jastroch, M., Withers, K.W., Taudien, S., Frappell, P.B., Helwig, M., Fromme, T., Hirschberg, V., Heldmaier, G., McAllan, B.M., Firth, B.T., Burmester, T., Platzer, M., and Klingenspor, M. (2008) Marsupial uncoupling protein 1 sheds light on the evolution of mammalian nonshivering thermogenesis. Physiological Genomics. 32(2):161-169

Saito, S., Saito, C.T., and Shingai, R. (2008) Adaptive evolution of the uncoupling protein 1 gene contributed to the acquisition of novel nonshivering thermogenesis in ancestral eutherian mammals. Gene. 408(1-2):37-44

Jastroch, M., Wuertz, S., Kloas, W., and Klingenspor, M. (2005) Uncoupling protein 1 in fish uncovers an ancient evolutionary history of mammalian nonshivering thermogenesis. Physiological Genomics. 22(2):150-156

Stuart, J.A., Cadenas, S., Jekabsons, M.B., Roussel, D., and Brand, M.D. (2001) Mitochondrial proton leak and the uncoupling protein 1 homologues. Biochim. Biophys. Acta Bio-Energetics. 1504(1):144-158