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Shi, P., Liao, K., Xu, J., Wang, Y., Xu, S., Yan, X. (2022) Eicosapentaenoic acid mitigates palmitic acid-induced heat shock response, inflammation and repair processes in fish intestine. Fish & shellfish immunology. 124:362-371

Wang, C., Chen, X., Dai, Y., Zhang, Y., Sun, Y., Cui, X. (2022) Comparative transcriptome analysis of heat-induced domesticated zebrafish during gonadal differentiation. BMC genomic data. 23:39

Yang, Y., Li, Y., Fu, J., Li, Y., Li, S., Ni, R., Yang, Q., Luo, L. (2022) Intestinal precursors avoid being misinduced to liver cells by activating Cdx-Wnt inhibition cascade. Proceedings of the National Academy of Sciences of the United States of America. 119:e2205110119

Zhao, S., Feng, S., Tian, Y., Wen, Z. (2022) Hemogenic and aortic endothelium arise from a common hemogenic angioblast precursor and are specified by the Etv2 dosage. Proceedings of the National Academy of Sciences of the United States of America. 119:e2119051119e2119051119

Zwaka, H., McGinnis, O.J., Pflitsch, P., Prabha, S., Mansinghka, V., Engert, F., Bolton, A.D. (2022) Visual object detection biases escape trajectories following acoustic startle in larval zebrafish. Current biology : CB. 32(23):5116-5125.e3

Allanki, S., Strilic, B., Scheinberger, L., Onderwater, Y.L., Marks, A., Günther, S., Preussner, J., Kikhi, K., Looso, M., Stainier, D.Y.R., Reischauer, S. (2021) Interleukin-11 signaling promotes cellular reprogramming and limits fibrotic scarring during tissue regeneration. Science advances. 7:eabg6497

Bertozzi, A., Wu, C.C., Hans, S., Brand, M., Weidinger, G. (2021) Wnt/β-catenin signaling acts cell-autonomously to promote cardiomyocyte regeneration in the zebrafish heart. Developmental Biology. 481:226-237

Cai, Y., Wang, J., Jin, D., Liu, Q., Xianglei, C., Lili, P., Yang, L., Wang, X., Qian, F., Wang, J., Zhong, T.P., Wang, S. (2021) Dhx15 regulates zebrafish definitive hematopoiesis through the unfolded protein response pathway. Cancer science. 112(9):3884-3894

Chen, J., Li, X., Ni, R., Chen, Q., Yang, Q., He, J., Luo, L. (2021) Acute brain vascular regeneration occurs via lymphatic transdifferentiation. Developmental Cell. 56(22):3115-3127.e6

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Hans, S., Zöller, D., Hammer, J., Stucke, J., Spieß, S., Kesavan, G., Kroehne, V., Eguiguren, J.S., Ezhkova, D., Petzold, A., Dahl, A., Brand, M. (2021) Cre-Controlled CRISPR mutagenesis provides fast and easy conditional gene inactivation in zebrafish. Nature communications. 12:1125

Klatt Shaw, D., Saraswathy, V.M., Zhou, L., McAdow, A.R., Burris, B., Butka, E., Morris, S.A., Dietmann, S., Mokalled, M.H. (2021) Localized EMT reprograms glial progenitors to promote spinal cord repair. Developmental Cell. 56(5):613-626.e7

Leventea, E., Zhu, Z., Fang, X., Nikolaeva, Y., Markham, E., Hirst, R.A., van Eeden, F.J.M., Malicki, J.J. (2021) Ciliopathy genes are required for apical secretion of Cochlin, an otolith crystallization factor. Proceedings of the National Academy of Sciences of the United States of America. 118(28):

Liu, M., Tang, L., Hu, C., Sun, B., Huang, Z., Chen, L. (2021) Interaction between probiotic additive and perfluorobutanesulfonate pollutant on offspring growth and health after parental exposure using zebrafish. Ecotoxicology and environmental safety. 214:112107

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Swartz, M.E., Lovely, C.B., Eberhart, J.K. (2021) Variation in phenotypes from a Bmp-Gata3 genetic pathway is modulated by Shh signaling. PLoS Genetics. 17:e1009579

Wilson, M.H., Ekker, S.C., Farber, S.A. (2021) Imaging cytoplasmic lipid droplets in vivo with fluorescent perilipin 2 and perilipin 3 knock-in zebrafish. eLIFE. 10

Ye, Z., Braden, C.R., Wills, A., Kimelman, D. (2021) Identification of in vivo Hox13-binding sites reveals an essential locus controlling zebrafish brachyury expression. Development (Cambridge, England). 148(11):

Yoshimatsu, T., Bartel, P., Schröder, C., Janiak, F.K., St-Pierre, F., Berens, P., Baden, T. (2021) Ancestral circuits for vertebrate color vision emerge at the first retinal synapse. Science advances. 7:eabj6815

Zhao, C., Lancman, J.J., Yang, Y., Gates, K.P., Cao, D., Barske, L., Matalonga, J., Pan, X., He, J., Graves, A., Huisken, J., Chen, C., Dong, P.D.S. (2021) Intrahepatic cholangiocyte regeneration from an Fgf-dependent extrahepatic progenitor niche in a zebrafish model of Alagille Syndrome. Hepatology (Baltimore, Md.). 75(3):567-583

Zizioli, D., Bernardi, S., Varinelli, M., Farina, M., Mignani, L., Bosio, K., Finazzi, D., Monti, E., Polverelli, N., Malagola, M., Borsani, E., Borsani, G., Russo, D. (2021) Development of BCR-ABL1 Transgenic Zebrafish Model Reproducing Chronic Myeloid Leukemia (CML) Like-Disease and Providing a New Insight into CML Mechanisms. Cells. 10(2):

Anderson, R.A., Schwalbach, K.T., Mui, S.R., LeClair, E.E., Topczewska, J.M., Topczewski, J. (2020) Zebrafish models of skeletal dysplasia induced by cholesterol biosynthesis deficiency. Disease models & mechanisms. 13(6):

Asakawa, K., Handa, H., Kawakami, K. (2020) Optogenetic modulation of TDP-43 oligomerization accelerates ALS-related pathologies in the spinal motor neurons. Nature communications. 11:1004

Barske, L., Fabian, P., Hirschberger, C., Jandzik, D., Square, T., Xu, P., Nelson, N., Yu, H.V., Medeiros, D.M., Gillis, J.A., Crump, J.G. (2020) Evolution of vertebrate gill covers via shifts in an ancient Pou3f3 enhancer. Proceedings of the National Academy of Sciences of the United States of America. 117(40):24876-24884

Bryan, C.D., Casey, M.A., Pfeiffer, R.L., Jones, B.W., Kwan, K.M. (2020) Optic cup morphogenesis requires neural crest-mediated basement membrane assembly. Development (Cambridge, England). 147(4):

Ding, Y., Wang, W., Ma, D., Liang, G., Kang, Z., Xue, Y., Zhang, Y., Wang, L., Heng, J., Zhang, Y., Liu, F. (2020) Smarca5 mediated epigenetic programming facilitates fetal HSPC development in vertebrates. Blood. 137(2):190-202

Frame, J.M., Kubaczka, C., Long, T.L., Esain, V., Soto, R.A., Hachimi, M., Jing, R., Shwartz, A., Goessling, W., Daley, G.Q., North, T.E. (2020) Metabolic Regulation of Inflammasome Activity Controls Embryonic Hematopoietic Stem and Progenitor Cell Production. Developmental Cell. 55(2):133-149.e6

Guillon, E., Das, D., Jülich, D., Hassan, A.R., Geller, H., Holley, S. (2020) Fibronectin is a smart adhesive that both influences and responds to the mechanics of early spinal column development. eLIFE. 9:

Han, S.L., Liu, Y., Limbu, S.M., Chen, L.Q., Zhang, M.L., Du, Z.Y. (2020) The reduction of lipid-sourced energy production caused by ATGL inhibition cannot be compensated by activation of HSL, autophagy, and utilization of other nutrients in fish. Fish physiology and biochemistry. 47(1):173-188

Hemalatha, D., Rangasamy, B., Nataraj, B., Maharajan, K., Narayanasamy, A., Ramesh, M. (2020) Transcriptional, biochemical and histological alterations in adult zebrafish (Danio rerio) exposed to benzotriazole ultraviolet stabilizer-328. The Science of the total environment. 739:139851

Huang, W., Zheng, S., Xiao, J., Liu, C., Du, T., Wu, K. (2020) Parental exposure to bisphenol A affects pharyngeal cartilage development and causes global transcriptomic changes in zebrafish (Danio rerio) offspring. Chemosphere. 249:126537

Kantarci, H., Gou, Y., Riley, B.B. (2020) The Warburg Effect and lactate signaling augment Fgf-MAPK to promote sensory-neural development in the otic vesicle. eLIFE. 9:

Lee, H.J., Hou, Y., Chen, Y., Dailey, Z.Z., Riddihough, A., Jang, H.S., Wang, T., Johnson, S.L. (2020) Regenerating zebrafish fin epigenome is characterized by stable lineage-specific DNA methylation and dynamic chromatin accessibility. Genome biology. 21:52

Levic, D.S., Ryan, S., Marjoram, L., Honeycutt, J., Bagwell, J., Bagnat, M. (2020) Distinct roles for luminal acidification in apical protein sorting and trafficking in zebrafish. The Journal of cell biology. 219(4):

Liyanage, T.D., Dahanayake, P.S., Edirisinghe, S.L., Nikapitiya, C., Heo, G.J., De Zoysa, M., Whang, I. (2020) Biological Activity of Porcine Gastric Mucin on Stress Resistance and Immunomodulation. Molecules. 25(13):

Ma, X., Zhu, P., Ding, Y., Zhang, H., Qiu, Q., Dvornikov, A.V., Wang, Z., Kim, M., Wang, Y., Lowerison, M., Yu, Y., Norton, N., Herrmann, J., Ekker, S.C., Hsiai, T.K., Lin, X., Xu, X. (2020) Retinoid X receptor alpha is a spatiotemporally predominant therapeutic target for anthracycline-induced cardiotoxicity. Science advances. 6:eaay2939

Mondal, P., Shaw, P., Dey Bhowmik, A., Bandyopadhyay, A., Sudarshan, M., Chakraborty, A., Chattopadhyay, A. (2020) Combined effect of arsenic and fluoride at environmentally relevant concentrations in zebrafish (Danio rerio) brain: Alterations in stress marker and apoptotic gene expression. Chemosphere. 269:128678

Nishiwaki, Y., Masai, I. (2020) β-SNAP activity in the outer segment growth period is critical for preventing BNip1-dependent apoptosis in zebrafish photoreceptors. Scientific Reports. 10:17379

Peng, X., Lai, K.S., She, P., Kang, J., Wang, T., Li, G., Zhou, Y., Sun, J., Jin, D., Xu, X., Liao, L., Liu, J., Lee, E., Poss, K.D., Zhong, T.P. (2020) Induction of Wnt signaling antagonists and p21-activated kinase enhances cardiomyocyte proliferation during zebrafish heart regeneration. Journal of molecular cell biology. 13(1):41-58

Rajapaksha, D.C., Edirisinghe, S.L., Nikapitiya, C., Dananjaya, S., Kwun, H.J., Kim, C.H., Oh, C., Kang, D.H., De Zoysa, M. (2020) Spirulina maxima Derived Pectin Nanoparticles Enhance the Immunomodulation, Stress Tolerance, and Wound Healing in Zebrafish. Marine drugs. 18(11):

Schredelseker, T., Veit, F., Dorsky, R.I., Driever, W. (2020) Bsx Is Essential for Differentiation of Multiple Neuromodulatory Cell Populations in the Secondary Prosencephalon. Frontiers in neuroscience. 14:525

Shaw, P., Sen, A., Mondal, P., Dey Bhowmik, A., Rath, J., Chattopadhyay, A. (2020) Shinorine ameliorates chromium induced toxicity in zebrafish hepatocytes through the facultative activation of Nrf2-Keap1-ARE pathway. Aquatic toxicology (Amsterdam, Netherlands). 228:105622

Sun, X., Zhou, Y., Zhang, R., Wang, Z., Xu, M., Zhang, D., Huang, J., Luo, F., Li, F., Ni, Z., Zhou, S., Chen, H., Chen, S., Chen, L., Du, X., Chen, B., Huang, H., Liu, P., Yin, L., Qiu, J., Chen, D., Deng, C., Xie, Y., Luo, L., Chen, L. (2020) Dstyk mutation leads to congenital scoliosis-like vertebral malformations in zebrafish via dysregulated mTORC1/TFEB pathway. Nature communications. 11:479

Uemura, Y., Kato, K., Kawakami, K., Kimura, Y., Oda, Y., Higashijima, S.I. (2020) Neuronal circuits that control rhythmic pectoral fin movements in zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 40(35):6678-6690

Viganò, L., Casatta, N., Farkas, A., Mascolo, G., Roscioli, C., Stefani, F., Vitelli, M., Olivo, F., Clerici, L., Robles, P., Dellavedova, P. (2020) Embryo/larval toxicity and transcriptional effects in zebrafish (Danio rerio) exposed to endocrine active riverbed sediments. Environmental science and pollution research international. 27(10):10729-10747

Wang, M., Du, L., Lee, A.C., Li, Y., Qin, H., He, J. (2020) Different lineage contexts direct common pro-neural factors to specify distinct retinal cell subtypes. The Journal of cell biology. 219(9):

Wu, Y.C., Wang, I.J. (2020) Heat-shock-induced tyrosinase gene ablation with CRISPR in zebrafish. Molecular genetics and genomics : MGG. 295(4):911-922

Ye, Z., Su, Z., Xie, S., Liu, Y., Wang, Y., Xu, X., Zheng, Y., Zhao, M., Jiang, L. (2020) Yap-lin28a axis targets let7-Wnt pathway to restore progenitors for initiating regeneration. eLIFE. 9:

Abdelmoneim, A., Clark, C., Mukai, M. (2019) Fluorescent reporter zebrafish line for estrogenic compound screening generated using a CRISPR/Cas9-mediated knock-in system. Toxicological sciences : an official journal of the Society of Toxicology. 173(2):336-346

Alassaf, M., Daykin, E.C., Mathiaparanam, J., Wolman, M.A. (2019) Pregnancy-associated plasma protein-aa supports hair cell survival by regulating mitochondrial function. eLIFE. 8:

Bailey, E.C., Alrowaished, S.S., Kilroy, E.A., Crooks, E.S., Drinkert, D.M., Karunasiri, C.M., Belanger, J.J., Khalil, A., Kelley, J.B., Henry, C.A. (2019) NAD+ improves neuromuscular development in a zebrafish model of FKRP-associated dystroglycanopathy. Skeletal muscle. 9:21

Bensimon-Brito, A., Ramkumar, S., Boezio, G.L.M., Guenther, S., Kuenne, C., Helker, C.S.M., Sánchez-Iranzo, H., Iloska, D., Piesker, J., Pullamsetti, S., Mercader, N., Beis, D., Stainier, D.Y.R. (2019) TGF-β Signaling Promotes Tissue Formation during Cardiac Valve Regeneration in Adult Zebrafish. Developmental Cell. 52(1):9-20.e7

Cabezas-Sanchez, P., Rainieri, S., Conlledo, N., Barranco, A., Sanz-Landaluze, J., Camara, C., Luque-Garcia, J.L. (2019) Impact of selenium co-administration on methylmercury exposed eleutheroembryos and adult zebrafish (Danio rerio): Changes in bioaccumulation and gene expression. Chemosphere. 236:124295

Chen, J., He, J., Ni, R., Yang, Q., Zhang, Y., Luo, L. (2019) Cerebrovascular Injuries Induce Lymphatic Invasion into Brain Parenchyma to Guide Vascular Regeneration in Zebrafish. Developmental Cell. 49(5):697-710.e5

Cox, J.A., Voigt, M.M. (2019) The Metalloproteinase adam19b Is Required for Sensory Axon Guidance in the Hindbrain. Frontiers in neural circuits. 13:14

Eckert, P., Knickmeyer, M.D., Schütz, L., Wittbrodt, J., Heermann, S. (2019) Morphogenesis and axis specification occur in parallel during optic cup and optic fissure formation, differentially modulated by BMP and Wnt. Open Biology. 9:180179

Fei, F., Wang, L., Sun, S., Lv, K., Yao, Y., Wang, J., Yu, M., Wang, X. (2019) Transgenic Strategies to Generate Heterogeneous Hepatic Cancer Models in Zebrafish. Journal of molecular cell biology. 11(11):1021-1023

Ghersi, J.J., Mahony, C.B., Bertrand, J.Y. (2019) bif1, a new BMP signaling inhibitor, regulates embryonic hematopoiesis in the zebrafish. Development (Cambridge, England). 146(6):

Gu, Q., Yang, X., Lv, J., Zhang, J., Xia, B., Kim, J.D., Wang, R., Xiong, F., Meng, S., Clements, T.P., Tandon, B., Wagner, D.S., Diaz, M.F., Wenzel, P.L., Miller, Y.I., Traver, D., Cooke, J.P., Li, W., Zon, L.I., Chen, K., Bai, Y., Fang, L. (2019) AIBP-mediated cholesterol efflux instructs hematopoietic stem and progenitor cell fate. Science (New York, N.Y.). 363:1085-1088

Gungor, B., Vanharanta, L., Hölttä-Vuori, M., Pirhonen, J., Petersen, N.H.T., Gramolelli, S., Ojala, P.M., Kirkegaard, T., Ikonen, E. (2019) HSP70 induces liver X receptor pathway activation and cholesterol reduction in vitro and in vivo. Molecular metabolism. 28:135-143

Hall, T.E., Wood, A.J., Ehrlich, O., Li, M., Sonntag, C.S., Cole, N.J., Huttner, I.G., Sztal, T.E., Currie, P.D. (2019) Cellular rescue in a zebrafish model of congenital muscular dystrophy type 1A. NPJ Regenerative medicine. 4:21

Hartwell, R.D., England, S.J., Monk, N.A.M., van Hateren, N.J., Baxendale, S., Marzo, M., Lewis, K.E., Whitfield, T.T. (2019) Anteroposterior patterning of the zebrafish ear through Fgf- and Hh-dependent regulation of hmx3a expression. PLoS Genetics. 15:e1008051

He, Y., Li, X., Jia, D., Zhang, W., Zhang, T., Yu, Y., Xu, Y., Zhang, Y. (2019) A transcriptomics-based analysis of the toxicity mechanisms of gabapentin to zebrafish embryos at realistic environmental concentrations. Environmental pollution (Barking, Essex : 1987). 251:746-755

Ji, C., Yan, L., Chen, Y., Yue, S., Dong, Q., Chen, J., Zhao, M. (2019) Evaluation of the developmental toxicity of 2,7-dibromocarbazole to zebrafish based on transcriptomics assay. Journal of hazardous materials. 368:514-522

Kuroki-Kami, A., Nichuguti, N., Yatabe, H., Mizuno, S., Kawamura, S., Fujiwara, H. (2019) Targeted gene knockin in zebrafish using the 28S rDNA-specific non-LTR-retrotransposon R2Ol. Mobile DNA. 10:23

Li, D.L., Huang, Y.J., Gao, S., Chen, L.Q., Zhang, M.L., Du, Z.Y. (2019) Sex-specific alterations of lipid metabolism in zebrafish exposed to polychlorinated biphenyls. Chemosphere. 221:768-777

Li, X., Kong, H., Ji, X., Gao, Y., Jin, M. (2019) Zebrafish behavioral phenomics applied for phenotyping aquatic neurotoxicity induced by lead contaminants of environmentally relevant level. Chemosphere. 224:445-454

Marín-Juez, R., El-Sammak, H., Helker, C.S.M., Kamezaki, A., Mullapuli, S.T., Bibli, S.I., Foglia, M.J., Fleming, I., Poss, K.D., Stainier, D.Y.R. (2019) Coronary Revascularization During Heart Regeneration Is Regulated by Epicardial and Endocardial Cues and Forms a Scaffold for Cardiomyocyte Repopulation. Developmental Cell. 51:503-515.e4

Mourabit, S., Fitzgerald, J.A., Ellis, R.P., Takesono, A., Porteus, C.S., Trznadel, M., Metz, J., Winter, M.J., Kudoh, T., Tyler, C.R. (2019) New insights into organ-specific oxidative stress mechanisms using a novel biosensor zebrafish. Environment International. 133:105138

Park, J., Levic, D.S., Sumigray, K.D., Bagwell, J., Eroglu, O., Block, C.L., Eroglu, C., Barry, R., Lickwar, C.R., Rawls, J.F., Watts, S.A., Lechler, T., Bagnat, M. (2019) Lysosome-Rich Enterocytes Mediate Protein Absorption in the Vertebrate Gut. Developmental Cell. 51(1):7-20.e6

Schwartz, M.S., Schnabl, J., Litz, M.P.H., Baumer, B.S., Barresi, M. (2019) ΔSCOPE: A new method to quantify 3D biological structures and identify differences in zebrafish forebrain development. Developmental Biology. 460(2):115-138

Skvarca, L.B., Han, H.I., Espiritu, E.B., Missinato, M.A., Rochon, E.R., McDaniels, M.D., Bais, A.S., Roman, B.L., Waxman, J.S., Watkins, S.C., Davidson, A.J., Tsang, M., Hukriede, N.A. (2019) Enhancing acute kidney injury regeneration by promoting cellular dedifferentiation in zebrafish. Disease models & mechanisms. 12(4):

Sun, H.J., Zhang, J.Y., Wang, Q., Zhu, E., Chen, W., Lin, H., Chen, J., Hong, H. (2019) Environmentally relevant concentrations of arsenite induces developmental toxicity and oxidative responses in the early life stage of zebrafish. Environmental pollution (Barking, Essex : 1987). 254:113022

Teixidó, E., Barenys, M., Piqué, E., Llobet, J.M., Gómez-Catalán, J. (2019) Cardiovascular Effects of PCB 126 (3,3',4,4',5-Pentachlorobiphenyl) in Zebrafish Embryos and Impact of Co-Exposure to Redox Modulating Chemicals. International Journal of Molecular Sciences. 20(5)

Xu, M., Ye, Y., Ye, Z., Xu, S., Liu, W., Xu, J., Zhang, Y., Liu, Q., Huang, Z., Zhang, W. (2019) Human BCR/ABL1 induces chronic myeloid leukemia-like disease in zebrafish. Haematologica. 105(3):674-686

Ye, D., Wang, X., Wei, C., He, M., Wang, H., Wang, Y., Zhu, Z., Sun, Y. (2019) Marcksb plays a key role in the secretory pathway of zebrafish Bmp2b. PLoS Genetics. 15:e1008306

Zhao, L., Ben-Yair, R., Burns, C.E., Burns, C.G. (2019) Endocardial Notch Signaling Promotes Cardiomyocyte Proliferation in the Regenerating Zebrafish Heart through Wnt Pathway Antagonism. Cell Reports. 26:546-554.e5

Addison, M., Xu, Q., Cayuso, J., Wilkinson, D.G. (2018) Cell Identity Switching Regulated by Retinoic Acid Signaling Maintains Homogeneous Segments in the Hindbrain. Developmental Cell. 45:606-620.e3

Coffey, E.C., Pasquarella, M.E., Goody, M.F., Henry, C.A. (2018) Ethanol Exposure Causes Muscle Degeneration in Zebrafish. Journal of developmental biology. 6(1)

Donat, S., Lourenço, M., Paolini, A., Otten, C., Renz, M., Abdelilah-Seyfried, S. (2018) Heg1 and Ccm1/2 proteins control endocardial mechanosensitivity during zebrafish valvulogenesis. eLIFE. 7:e28939

Elsaeidi, F., Macpherson, P., Mills, E.A., Jui, J., Flannery, J.G., Goldman, D. (2018) Notch suppression collaborates with Ascl1 and Lin28 to unleash a regenerative response in fish retina, but not in mice. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38(9):2246-2261

Freudenblum, J., Iglesias, J.A., Hermann, M., Walsen, T., Wilfinger, A., Meyer, D., Kimmel, R.A. (2018) In vivo imaging of emerging endocrine cells reveals a requirement for PI3K-regulated motility in pancreatic islet morphogenesis.. Development (Cambridge, England). 145(3)

González-Rosa, J.M., Sharpe, M., Field, D., Soonpaa, M.H., Field, L.J., Burns, C.E., Burns, C.G. (2018) Myocardial Polyploidization Creates a Barrier to Heart Regeneration in Zebrafish. Developmental Cell. 44:433-446.e7

Guo, C., Zou, J., Wen, Y., Fang, W., Stolz, D.B., Sun, M., Wei, X. (2018) Apical Cell-Cell Adhesions Reconcile Symmetry and Asymmetry in Zebrafish Neurulation. iScience. 3:63-85

Hübner, K., Cabochette, P., Diéguez-Hurtado, R., Wiesner, C., Wakayama, Y., Grassme, K.S., Hubert, M., Guenther, S., Belting, H.G., Affolter, M., Adams, R.H., Vanhollebeke, B., Herzog, W. (2018) Wnt/β-catenin signaling regulates VE-cadherin-mediated anastomosis of brain capillaries by counteracting S1pr1 signaling. Nature communications. 9:4860

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Schneider, D.A., Choi, S.H., Agatisa-Boyle, C., Zhu, L., Kim, J., Pattison, J., Sears, D.D., Gordts, P.L.S.M., Fang, L., Miller, Y.I. (2018) AIBP protects against metabolic abnormalities and atherosclerosis. Journal of Lipid Research. 59(5):854-863

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Sæle, Ø., Rød, K.E.L., Quinlivan, V.H., Li, S., Farber, S.A. (2018) A novel system to quantify intestinal lipid digestion and transport. Biochimica et biophysica acta. 1863(9):948-957

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Zhong, Y., Ye, Q., Chen, C., Wang, M., Wang, H. (2018) Ezh2 promotes clock function and hematopoiesis independent of histone methyltransferase activity in zebrafish. Nucleic acids research. 46(7):3382-3399

Armant, O., Gombeau, K., Murat El Houdigui, S., Floriani, M., Camilleri, V., Cavalie, I., Adam-Guillermin, C. (2017) Zebrafish exposure to environmentally relevant concentration of depleted uranium impairs progeny development at the molecular and histological levels. PLoS One. 12:e0177932

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Bloomekatz, J., Singh, R., Prall, O.W., Dunn, A.C., Vaughan, M., Loo, C.S., Harvey, R.P., Yelon, D. (2017) Platelet-derived growth factor (PDGF) signaling directs cardiomyocyte movement toward the midline during heart tube assembly. eLIFE. 6

Della Torre, C., Parolini, M., Del Giacco, L., Ghilardi, A., Ascagni, M., Santo, N., Maggioni, D., Magni, S., Madaschi, L., Prosperi, L., La Portaac, C., Binelli, A. (2017) Adsorption of B(α)P on carbon nanopowder affects accumulation and toxicity in zebrafish (Danio rerio) embryos. Environmental science. Nano. 4:1132-1146

Erickson, T., Morgan, C.P., Olt, J., Hardy, K., Busch-Nentwich, E.M., Maeda, R., Clemens-Grisham, R., Krey, J.F., Nechiporuk, A.V., Barr-Gillespie, P.G., Marcotti, W., Nicolson, T. (2017) Integration of Tmc1/2 into the mechanotransduction complex in zebrafish hair cells is regulated by Transmembrane O-methyltransferase (Tomt). eLIFE. 6

Gallagher, T.L., Tietz, K.T., Morrow, Z.T., McCammon, J.M., Goldrich, M.L., Derr, N.L., Amacher, S.L. (2017) Pnrc2 regulates 3'UTR-mediated decay of segmentation clock-associated transcripts during zebrafish segmentation. Developmental Biology. 429(1):225-239

Gonzalez, T.J., Lu, Y., Boswell, M., Boswell, W., Medrano, G., Walter, S., Ellis, S., Savage, M., Varga, Z.M., Lawrence, C., Sanders, G., Walter, R.B. (2017) Fluorescent light exposure incites acute and prolonged immune responses in Zebrafish (Danio rerio) skin. Comparative biochemistry and physiology. Toxicology & pharmacology : CBP. 208:87-95

Guo, S.N., Zheng, J.L., Yuan, S.S., Zhu, Q.L. (2017) Effects of heat and cadmium exposure on stress-related responses in the liver of female zebrafish: Heat increases cadmium toxicity. The Science of the total environment. 618:1363-1370

Hasegawa, T., Hall, C.J., Crosier, P.S., Abe, G., Kawakami, K., Kudo, A., Kawakami, A. (2017) Transient inflammatory response mediated by interleukin-1β is required for proper regeneration in zebrafish fin fold. eLIFE. 6

He, S., Ran, C., Qin, C., Li, S., Zhang, H., de Vos, W.M., Ringø, E., Zhou, Z. (2017) Anti-Infective Effect of Adhesive Probiotic Lactobacillus in Fish is Correlated With Their Spatial Distribution in the Intestinal Tissue. Scientific Reports. 7:13195

Hou, L.P., Yang, Y., Shu, H., Ying, G.G., Zhao, J.L., Chen, Y.B., Chen, Y.H., Fang, G.Z., Li, X., Liu, J.S. (2017) Changes in Histopathology, Enzyme Activities, and the Expression of Relevant Genes in Zebrafish (Danio rerio) Following Long-Term Exposure to Environmental Levels of Thallium. Bulletin of environmental contamination and toxicology. 99(5):574-581

Jin, D., Zhu, D., Fang, Y., Chen, Y., Yu, G., Pan, W., Liu, D., Li, F., Zhong, T.P. (2017) Vegfa signaling regulates diverse artery/vein formation in vertebrate vasculatures. Journal of genetics and genomics = Yi chuan xue bao. 44(10):483-492

Kara, N., Wei, C., Commanday, A.C., Patton, J.G. (2017) miR-27 regulates chondrogenesis by suppressing Focal Adhesion Kinase during pharyngeal arch development. Developmental Biology. 429(1):321-334

Lee, D.A., Andreev, A., Truong, T.V., Chen, A., Hill, A.J., Oikonomou, G., Pham, U., Hong, Y.K., Tran, S., Glass, L., Sapin, V., Engle, J., Fraser, S.E., Prober, D.A. (2017) Genetic and neuronal regulation of sleep by neuropeptide VF. eLIFE. 6

Liu, P., Zhong, T.P. (2017) MAPK/ERK signalling is required for zebrafish cardiac regeneration. Biotechnology Letters. 39(7):1069-1077

Marsman, J., Thomas, A., Osato, M., O'Sullivan, J.M., Horsfield, J.A. (2017) A DNA Contact Map for the Mouse Runx1 Gene Identifies Novel Haematopoietic Enhancers. Scientific Reports. 7:13347

McArthur, K.L., Fetcho, J.R. (2017) Key Features of Structural and Functional Organization of Zebrafish Facial Motor Neurons Are Resilient to Disruption of Neuronal Migration. Current biology : CB. 27(12):1746-1756.e5

Mills, M.G., Gallagher, E.P. (2017) A targeted gene expression platform allows for rapid analysis of chemical-induced antioxidant mRNA expression in zebrafish larvae. PLoS One. 12:e0171025

Otis, J.P., Shen, M.C., Quinlivan, V., Anderson, J.L., Farber, S.A. (2017) Intestinal epithelial cell Caveolin 1 regulates fatty acid and lipoprotein cholesterol plasma levels. Disease models & mechanisms. 10(3):283-295

Rainieri, S., Conlledo, N., Langerholc, T., Madorran, E., Sala, M., Barranco, A. (2017) Toxic effects of perfluorinated compounds at human cellular level and on a model vertebrate. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 104:14-25

Santos da Rosa, J.G., Alcântara Barcellos, H.H., Fagundes, M., Variani, C., Rossini, M., Kalichak, F., Koakoski, G., Acosta Oliveira, T., Idalencio, R., Frandoloso, R., Piato, A.L., José Gil Barcellos, L. (2017) Muscarinic receptors mediate the endocrine-disrupting effects of an organophosphorus insecticide in zebrafish. Environmental toxicology. 32(7):1964-1972

Sonnack, L., Klawonn, T., Kriehuber, R., Hollert, H., Schäfers, C., Fenske, M. (2017) Comparative analysis of the transcriptome responses of zebrafish embryos after exposure to low concentrations of cadmium, cobalt and copper. Comparative biochemistry and physiology. Part D, Genomics & proteomics. 25:99-108

Torvund, M.M., Ma, T.S., Connaughton, V.P., Ono, F., Nelson, R.F. (2017) Cone signals in monostratified and bistratified amacrine cells of adult zebrafish retina. The Journal of comparative neurology. 525(7):1532-1557

Wang, X.H., Souders, C.L., Zhao, Y.H., Martyniuk, C.J. (2017) Mitochondrial bioenergetics and locomotor activity are altered in zebrafish (Danio rerio) after exposure to the bipyridylium herbicide diquat. Toxicology letters. 283:13-20

Zhang, C.N., Zhang, J.L., Ren, H.T., Zhou, B.H., Wu, Q.J., Sun, P. (2017) Effect of tributyltin on antioxidant ability and immune responses of zebrafish (Danio rerio). Ecotoxicology and environmental safety. 138:1-8

Zheng, J.L., Guo, S.N., Yuan, S.S., Xia, H., Zhu, Q.L., Lv, Z.M. (2017) Preheating mitigates cadmium toxicity in zebrafish livers: Evidence from promoter demethylation, gene transcription to biochemical levels. Aquatic toxicology (Amsterdam, Netherlands). 190:104-111

Zhu, Q.L., Guo, S.N., Yuan, S.S., Lv, Z.M., Zheng, J.L., Xia, H. (2017) Heat indicators of oxidative stress, inflammation and metal transport show dependence of cadmium pollution history in the liver of female zebrafish. Aquatic toxicology (Amsterdam, Netherlands). 191:1-9

Cayuso, J., Dzementsei, A., Fischer, J.C., Karemore, G., Caviglia, S., Bartholdson, J., Wright, G.J., Ober, E.A. (2016) EphrinB1/EphB3b Coordinate Bidirectional Epithelial-Mesenchymal Interactions Controlling Liver Morphogenesis and Laterality. Developmental Cell. 39:316-328

Chen, A., Chiu, C.N., Mosser, E.A., Kahn, S., Spence, R., Prober, D.A. (2016) QRFP and Its Receptors Regulate Locomotor Activity and Sleep in Zebrafish. The Journal of neuroscience : the official journal of the Society for Neuroscience. 36(6):1823-40

da Rosa, J.G., Koakoski, G., Piato, A.L., Bogo, M.R., Bonan, C.D., Barcellos, L.J. (2016) Impaired brain StAR and HSP70 gene expression in zebrafish exposed to Methyl-Parathion based insecticide. Journal of toxicology and environmental health. Part A. 79(1):1-7

de Peralta, M.S., Mouguelar, V.S., Sdrigotti, M.A., Ishiy, F.A., Fanganiello, R.D., Passos-Bueno, M.R., Coux, G., Calcaterra, N.B. (2016) Cnbp ameliorates Treacher Collins Syndrome craniofacial anomalies through a pathway that involves redox-responsive genes. Cell Death & Disease. 7:e2397

Enyedi, B., Jelcic, M., Niethammer, P. (2016) The Cell Nucleus Serves as a Mechanotransducer of Tissue Damage-Induced Inflammation. Cell. 165:1160-1170

Govindan, J., Tun, K.M., Iovine, M.K. (2016) Cx43-Dependent Skeletal Phenotypes Are Mediated by Interactions between the Hapln1a-ECM and Sema3d during Fin Regeneration. PLoS One. 11:e0148202

Icha, J., Kunath, C., Rocha-Martins, M., Norden, C. (2016) Independent modes of ganglion cell translocation ensure correct lamination of the zebrafish retina. The Journal of cell biology. 215:259-275

Jin, H., Huang, Z., Chi, Y., Wu, M., Zhou, R., Zhao, L., Xu, J., Zhen, F., Lan, Y., Li, L., Zhang, W., Wen, Z., Zhang, Y. (2016) cMyb acts in parallel and cooperatively with Cebp1 to regulate neutrophil maturation in zebrafish. Blood. 128(3):415-26

Kawamura, A., Ovara, H., Ooka, Y., Kinoshita, H., Hoshikawa, M., Nakajo, K., Yokota, D., Fujino, Y., Higashijima, S.I., Takada, S., Yamasu, K. (2016) Posterior-anterior gradient of zebrafish hes6 expression in the presomitic mesoderm is established by the combinatorial functions of the downstream enhancer and 3'UTR. Developmental Biology. 409(2):543-54

Koenig, A.L., Baltrunaite, K., Bower, N.I., Rossi, A., Stainier, D.Y., Hogan, B.M., Sumanas, S. (2016) Vegfa signaling promotes zebrafish intestinal vasculature development through endothelial cell migration from the posterior cardinal vein. Developmental Biology. 411(1):115-27

Lisse, T.S., King, B.L., Rieger, S. (2016) Comparative transcriptomic profiling of hydrogen peroxide signaling networks in zebrafish and human keratinocytes: Implications toward conservation, migration and wound healing. Scientific Reports. 6:20328

Matsuoka, R.L., Marass, M., Avdesh, A., Helker, C.S., Maischein, H.M., Grosse, A.S., Kaur, H., Lawson, N.D., Herzog, W., Stainier, D.Y. (2016) Radial glia regulate vascular patterning around the developing spinal cord. eLIFE. 5

Nichols, J.T., Blanco-Sánchez, B., Brooks, E.P., Parthasarathy, R., Dowd, J., Subramanian, A., Nachtrab, G., Poss, K.D., Schilling, T.F., Kimmel, C.B. (2016) Ligament versus bone cell identity in the zebrafish hyoid skeleton is regulated by mef2ca. Development (Cambridge, England). 143(23):4430-4440

Ott, E., Wendik, B., Srivastava, M., Pacho, F., Töchterle, S., Salvenmoser, W., Meyer, D. (2016) Pronephric tubule morphogenesis in zebrafish depends on Mnx mediated repression of irx1b within the intermediate mesoderm. Developmental Biology. 411(1):101-14

Richardson, R., Metzger, M., Knyphausen, P., Ramezani, T., Slanchev, K., Kraus, C., Schmelzer, E., Hammerschmidt, M. (2016) Re-epithelialization of cutaneous wounds in adult zebrafish uses a combination of mechanisms at play during wound closure in embryonic and adult mammals. Development (Cambridge, England). 143(12):2077-88

Safari, R., Hoseinifar, S.H., Kavandi, M. (2016) Modulation of antioxidant defense and immune response in zebra fish (Danio rerio) using dietary sodium propionate. Fish physiology and biochemistry. 42(6):1733-1739

Shibata, E., Yokota, Y., Horita, N., Kudo, A., Abe, G., Kawakami, K., Kawakami, A. (2016) Fgf signalling controls diverse aspects of fin regeneration. Development (Cambridge, England). 143:2920-9

Vaithianathan, T., Henry, D., Akmentin, W., Matthews, G. (2016) Nanoscale dynamics of synaptic vesicle trafficking and fusion at the presynaptic active zone. eLIFE. 5

Xiao, B., Chen, T.M., Zhong, Y. (2016) Possible molecular mechanism underlying cadmium-induced circadian rhythms disruption in zebrafish. Biochemical and Biophysical Research Communications. 481(3-4):201-205

Xu, J., Cui, J., Del Campo, A., Shin, C.H. (2016) Four and a Half LIM Domains 1b (Fhl1b) Is Essential for Regulating the Liver versus Pancreas Fate Decision and for β-Cell Regeneration. PLoS Genetics. 12:e1005831

Zhang, Q.F., Li, Y.W., Liu, Z.H., Chen, Q.L. (2016) Exposure to mercuric chloride induces developmental damage, oxidative stress and immunotoxicity in zebrafish embryos-larvae. Aquatic toxicology (Amsterdam, Netherlands). 181:76-85

Ariotti, N., Hall, T.E., Rae, J., Ferguson, C., McMahon, K.A., Martel, N., Webb, R.E., Webb, R.I., Teasdale, R.D., Parton, R.G. (2015) Modular Detection of GFP-Labeled Proteins for Rapid Screening by Electron Microscopy in Cells and Organisms. Developmental Cell. 35(4):513-25

Bouldin, C.M., Manning, A.J., Peng, Y.H., Farr, G.H., Hung, K.L., Dong, A., Kimelman, D. (2015) Wnt signaling and tbx16 form a bistable switch to commit bipotential progenitors to mesoderm. Development (Cambridge, England). 142:2499-507

Campbell, P.D., Chao, J.A., Singer, R.H., Marlow, F.L. (2015) Dynamic visualization of transcription and RNA subcellular localization in zebrafish. Development (Cambridge, England). 142(7):1368-74

Dzafic, E., Strzyz, P.J., Wilsch-Bräuninger, M., Norden, C. (2015) Centriole Amplification in Zebrafish Affects Proliferation and Survival but Not Differentiation of Neural Progenitor Cells. Cell Reports. 13(1):168-82

Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549

George, V., Colombo, S., Targoff, K.L. (2015) An early requirement for nkx2.5 Ensures first and Second heart field ventricular identity and cardiac function into adulthood. Developmental Biology. 400(1):10-22

Hesse, R.G., Kouklis, G.K., Ahituv, N., Pomerantz, J.H. (2015) The human ARF tumor suppressor senses blastema activity and suppresses epimorphic tissue regeneration. eLIFE. 4

Jing, L., Tamplin, O.J., Chen, M.J., Deng, Q., Patterson, S., Kim, P.G., Durand, E.M., McNeil, A., Green, J.M., Matsuura, S., Ablain, J., Brandt, M.K., Schlaeger, T.M., Huttenlocher, A., Daley, G.Q., Ravid, K., Zon, L.I. (2015) Adenosine signaling promotes hematopoietic stem and progenitor cell emergence. The Journal of experimental medicine. 212(5):649-63

Kim, B.J., Hancock, B.M., Bermudez, A., Cid, N.D., Reyes, E., van Sorge, N.M., Lauth, X., Smurthwaite, C.A., Hilton, B.J., Stotland, A., Banerjee, A., Buchanan, J., Wolkowicz, R., Traver, D., Doran, K.S. (2015) Bacterial induction of Snail1 contributes to blood-brain barrier disruption. The Journal of Clinical Investigation. 125(6):2473-83

Lin, M.I., Price, E.N., Boatman, S., Hagedorn, E.J., Trompouki, E., Satishchandran, S., Carspecken, C.W., Uong, A., DiBiase, A., Yang, S., Canver, M.C., Dahlberg, A., Lu, Z., Zhang, C.C., Orkin, S.H., Bernstein, I.D., Aster, J.C., White, R.M., Zon, L.I. (2015) Angiopoietin-like proteins stimulate HSPC development through interaction with Notch receptor signaling. eLIFE. 4

Marchegiani, S., Davis, T., Tessadori, F., van Haaften, G., Brancati, F., Hoischen, A., Huang, H., Valkanas, E., Pusey, B., Schanze, D., Venselaar, H., Vulto-van Silfhout, A.T., Wolfe, L.A., Tifft, C.J., Zerfas, P.M., Zambruno, G., Kariminejad, A., Sabbagh-Kermani, F., Lee, J., Tsokos, M.G., Lee, C.R., Ferraz, V., da Silva, E.M., Stevens, C.A., Roche, N., Bartsch, O., Farndon, P., Bermejo-Sanchez, E., Brooks, B.P., Maduro, V., Dallapiccola, B., Ramos, F.J., Chung, H.B., Le Caignec, C., Martins, F., Jacyk, W.K., Mazzanti, L., Brunner, H.G., Bakkers, J., Lin, S., Malicdan, M.C., Boerkoel, C.F., Gahl, W.A., de Vries, B.B., van Haelst, M.M., Zenker, M., Markello, T.C. (2015) Recurrent Mutations in the Basic Domain of TWIST2 Cause Ablepharon Macrostomia and Barber-Say Syndromes. American journal of human genetics. 97(1):99-110

Otis, J.P., Zeituni, E.M., Thierer, J.H., Anderson, J.L., Brown, A.C., Boehm, E.D., Cerchione, D.M., Ceasrine, A.M., Avraham-Davidi, I., Tempelhof, H., Yaniv, K., Farber, S.A. (2015) Zebrafish as a model for apolipoprotein biology: Comprehensive expression analysis and a role for ApoA-IV in regulating food intake. Disease models & mechanisms. 8(3):295-309

Redelstein, R., Zielke, H., Spira, D., Feiler, U., Erdinger, L., Zimmer, H., Wiseman, S., Hecker, M., Giesy, J.P., Seiler, T.B., Hollert, H. (2015) Bioaccumulation and molecular effects of sediment-bound metals in zebrafish embryos. Environmental science and pollution research international. 22(21):16290-304

Rydeen, A., Voisin, N., D'Aniello, E., Ravisankar, P., Devignes, C.S., Waxman, J.S. (2015) Excessive feedback of Cyp26a1 promotes cell non-autonomous loss of retinoic acid signaling. Developmental Biology. 405(1):47-55

Taylor, S.M., Alvarez-Delfin, K., Saade, C.J., Thomas, J.L., Thummel, R., Fadool, J.M., Hitchcock, P.F. (2015) The bHLH Transcription Factor NeuroD Governs Photoreceptor Genesis and Regeneration Through Delta-Notch Signaling. Investigative ophthalmology & visual science. 56:7496-7515

Wincent, E., Jonsson, M., Bottai, M., Lundstedt, S., Dreij, K. (2015) Aryl hydrocarbon receptor activation and developmental toxicity in zebrafish in response to soil extracts containing unsubstituted and oxygenated PAHs. Environmental science & technology. 49(6):3869-77

Xiong, F., Obholzer, N.D., Noche, R.R., Megason, S.G. (2015) Multibow: Digital Spectral Barcodes for Cell Tracing. PLoS One. 10:e0127822

Yin, L., Maddison, L.A., Li, M., Kara, N., LaFave, M.C., Varshney, G.K., Burgess, S.M., Patton, J.G., Chen, W. (2015) Multiplex Conditional Mutagenesis Using Transgenic Expression of Cas9 and sgRNAs. Genetics. 200(2):431-41

Becker, J.R., Chatterjee, S., Robinson, T.Y., Bennett, J.S., Panáková, D., Galindo, C.L., Zhong, L., Shin, J.T., Coy, S.M., Kelly, A.E., Roden, D.M., Lim, C.C., and MacRae, C.A. (2014) Differential activation of natriuretic peptide receptors modulates cardiomyocyte proliferation during development. Development (Cambridge, England). 141(2):335-345

Boerrigter, J.G., van de Vis, H.W., van den Bos, R., Abbink, W., Spanings, T., Zethof, J., Martinez, L.L., van Andel, W.F., Lopez-Luna, J., and Flik, G. (2014) Effects of Pro-Tex on zebrafish (Danio rerio) larvae, adult common carp (Cyprinus carpio) and adult yellowtail kingfish (Seriola lalandi). Fish physiology and biochemistry. 40(4):1201-12

Casari, A., Schiavone, M., Facchinello, N., Vettori, A., Meyer, D., Tiso, N., Moro, E., Argenton, F. (2014) A Smad3 transgenic reporter reveals TGF-beta control of zebrafish spinal cord development. Developmental Biology. 396(1):81-93

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