Publication	Data		Fish	Anatomy
Gordon et al., 2018	Fig. 1		ptch2tc294z/tc294z	eye morphology, abnormal optic fissure closure incomplete, abnormal
	Fig. 2		ptch2tc294z/tc294z	eye morphology, abnormal optic fissure morphology, abnormal optic fissure open, abnormal
	Fig. 3		ptch2tc294z/tc294z	optic cup cell migration process quality, abnormal optic stalk cell migration process quality, abnormal optic vesicle cell migration process quality, abnormal
	Fig. 4		ptch2tc294z/tc294z	optic cup cell migration process quality, abnormal optic stalk cell migration process quality, abnormal optic vesicle cell migration process quality, abnormal
	Fig. 6		ptch2tc294z/tc294z ,   ptch2tc294z/tc294z; z205Tg; z206Tg	immature eye mCherry expression increased amount, abnormal immature eye mCherry expression increased distribution, abnormal optic cup pax2a expression increased amount, abnormal optic cup pax2a expression increased distribution, abnormal optic fissure pax2a expression increased amount, abnormal optic fissure pax2a expression increased distribution, abnormal optic vesicle pax2a expression increased amount, abnormal optic vesicle pax2a expression increased distribution, abnormal
	Fig. 7		ptch2tc294z/tc294z	eye morphology, abnormal optic fissure closure incomplete, abnormal optic fissure morphology, abnormal optic fissure open, abnormal
	Fig. S1		ptch2tc294z/tc294z	optic cup cell migration process quality, abnormal optic fissure cell migration process quality, abnormal optic vesicle cell migration process quality, abnormal
Pan et al., 2017	Fig. 4		AB + MO1-ptch2	central nervous system gli1 expression increased amount, abnormal central nervous system nkx2.2b expression increased amount, abnormal somite gli1 expression increased amount, abnormal somite nkx2.2b expression increased amount, abnormal somite muscle pioneer increased amount, abnormal
	Fig. EV5		AB + MO1-ptch2	central nervous system foxa expression increased amount, abnormal central nervous system hhip expression increased amount, abnormal somite foxa expression increased amount, abnormal somite hhip expression increased amount, abnormal
Lee et al., 2012	Fig. 2		ptch2au1/au1	optic furrow open, abnormal
	Fig. 3		ptch2au1/au1	optic furrow open, abnormal retina displaced, abnormal retinal pigmented epithelium displaced, abnormal
	Fig. 4		ptch2au1/au1	optic stalk distended, abnormal
	Fig. table		ptch2au1/au1	optic furrow open, abnormal
Hammond et al., 2009	Fig. 1		ptch2hu1602/hu1602	ceratohyal cartilage ossified, abnormal ceratohyal cartilage physical object quality, abnormal endochondral ossification premature, abnormal hyosymplectic cartilage ossified, abnormal hyosymplectic cartilage physical object quality, abnormal Meckel's cartilage osteoblast increased amount, abnormal optic tectum proliferative, abnormal ventral mandibular arch proliferative, abnormal
	Fig. 3		ptch2hu1602/hu1602; zf132Tg	Meckel's cartilage osteoblast increased amount, abnormal osteoblast differentiation process quality, abnormal
	Fig. 5		ptch2hu1602/hu1602	caudal fin skeleton osteoclast differentiated, abnormal Meckel's cartilage osteoclast differentiated, abnormal neural arch osteoclast differentiated, abnormal opercular flap osteoclast differentiated, abnormal osteoclast differentiation premature, abnormal pharyngeal arch 7 skeleton osteoclast differentiated, abnormal
Wilson et al., 2009	Fig. 2		AB + MO1-ptch2	smoothened signaling pathway disrupted, abnormal
	Fig. S10		AB + MO1-ptch2	somite muscle pioneer increased amount, abnormal somite U-shaped, abnormal
Koudijs et al., 2008	Fig. 2		ptch2hu1602/hu1602	somite obtuse angle to somite, abnormal somite orientation somite, abnormal
Lee et al., 2008	Fig. 1		ptch2tc294z/tc294z	optic fissure closure incomplete, abnormal retina protruding, abnormal retinal pigmented epithelium protruding, abnormal
	Fig. 2		ptch2tc294z/tc294z	optic fissure closure incomplete, abnormal photoreceptor outer segment layer protruding, abnormal retina protruding, abnormal retinal ganglion cell axon disorganized, abnormal
	Fig. 4		ptch2tc294z/tc294z	optic fissure closure incomplete, abnormal optic stalk increased size, abnormal optic stalk kinked, abnormal optic stalk mislocalised, abnormal
	Fig. 5		ptch2tc294z/tc294z	optic stalk increased size, abnormal optic stalk mislocalised, abnormal optic vesicle decreased size, abnormal presumptive neural retina decreased size, abnormal
	Fig. 7		AB + MO1-ptch2	brain morphology, abnormal eye curved lateral, abnormal eye mislocalised medially, abnormal lens displaced, abnormal muscle morphology, abnormal optic fissure closure incomplete, abnormal retina protruding, abnormal
	Fig. S1		ptch2tc294z/tc294z	mandibular arch skeleton malformed, abnormal skeletal system development disrupted, abnormal ventral mandibular arch protruding, abnormal whole organism curved, abnormal whole organism decreased size, abnormal
Phenotype Annotation (1994-2006)	Fig. for (tc294z)		ptch2tc294z	eye quality, abnormal nervous system quality, abnormal retinal ganglion cell axon guidance quality, abnormal sensory system quality, abnormal
Wolff et al., 2003	Fig. 2		WT + MO1-ptch2	fast muscle cell increased amount, abnormal fast muscle cell mislocalised, abnormal muscle pioneer increased amount, abnormal muscle pioneer mislocalised, abnormal slow muscle cell increased amount, abnormal slow muscle cell mislocalised, abnormal
Karlstrom et al., 1996	Fig. 1		ptch2tc294z/tc294z	retinal ganglion cell axon guidance process quality, abnormal retinal ganglion cell axon ipsilateral to eye, abnormal retinal ganglion cell cell body mislocalised, abnormal
	Fig. 2		ptch2tc294z/tc294z	eye protruding into diencephalon, abnormal eye structure, abnormal