Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
21	38.1 cM	z7809	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
21	153.22 cR	Z7809	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
21	2056.0 cR	z7809	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z7609	SSLP	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
dlat	GENE	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
dixdc1b	GENE	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
ddx10	GENE	21		Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
ncam1a	GENE	21	2.02 cR	Auer et al., 2007	Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and  ... Auer RL et al (Br. J Hematol. 137, 443-453) mapped the zebrafish orthologs and syntenic region on human 11q22-23 to zebrafish LG 21. The genes were mapped using the LN54 RH panel in the order: z7809 - ncam1 - dlat- dixdc1b - ddx10 - z7609.
sbu2	Feature	21		Kok et al., 2007	Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and  ... Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and Z10432
z10432	SSLP	21		Kok et al., 2007	Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and  ... Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and Z10432
birc2	GENE	21		Santoro et al., 2007	Santoro et al (2007) mapped the birc2 locus to LG 21 near marker z7809, on BAC  ... Santoro et al (2007) mapped the birc2 locus to LG 21 near marker z7809, on BAC clone DKEYP-69C1.

OTHER MAPPING INFORMATION

Chr 21 Kok et al., 2007 Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and Z10432 Kok et al. (2007) show that SBU2 maps to linkage group 21 between Z7809 and Z10432   Chr 21 Santoro et al., 2007 Santoro et al (2007) mapped the birc2 locus to LG 21 near marker z7809, on BAC clone DKEYP-69C1. Santoro et al (2007) mapped the birc2 locus to LG 21 near marker z7809, on BAC clone DKEYP-69C1.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
IND	276,0,216		60.0
Forward Primer	GCCCTCCATTTGCAGTTCTA
Reverse Primer	ACAGATGGTGAGAGCGTGTG
AB	254,0,282		60.0
Forward Primer	GCCCTCCATTTGCAGTTCTA
Reverse Primer	ACAGATGGTGAGAGCGTGTG
EKW	226,0,254		60.0
Forward Primer	GCCCTCCATTTGCAGTTCTA
Reverse Primer	ACAGATGGTGAGAGCGTGTG
TU	0,282		60.0
Forward Primer	GCCCTCCATTTGCAGTTCTA
Reverse Primer	ACAGATGGTGAGAGCGTGTG