ZFIN ID: ZDB-GENE-030131-525

Mapping Details

Gene Name: iroquois homeobox 3b
Symbol: irx3b
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 25 36,488,164 - 36,492,779 GRCz11
Ensembl 25 36,488,164 - 36,492,779 GRCz11
Vega 25 35,901,116 - 35,905,788 GRCv10
NCBI Map Viewer 25 36,488,164 - 36,492,779 GRCz11
UCSC 25 - GRCv10
Mapped Clones containing irx3b
CH73-140F21 Chr: 25 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
nz14 25 36,492,574 - 36,492,602 GRCz11 Naylor et al., 2018
sa24733 25 36,488,285 GRCz11 Busch-Nentwich et al., 2013
25 35,905,673 GRCz10 Busch-Nentwich et al., 2013
25 37,492,117 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
25 88.0 cM irx3b Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
sall1b GENE 25 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
amfra GENE 25 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
irx5b GENE 25 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
rbl2 GENE 25 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to  ...
z1213 SSLP 25 Feijoo et al., 2004 Feijoo et al. (2004 Dev. Genes Evol. 214(6):277-284) report mapping irx3b to LG25 using the T51 radiation hybrid panel.
sall1b GENE 25 Titus et al., 2006 Titus et al (Gene 371, 211-223) mapped the fanca gene to LG25 using the HS  ...
chmp1a GENE 25 Titus et al., 2006 Titus et al (Gene 371, 211-223) mapped the fanca gene to LG25 using the HS  ...
amfra GENE 25 Titus et al., 2006 Titus et al (Gene 371, 211-223) mapped the fanca gene to LG25 using the HS  ...
fanca GENE 25 Titus et al., 2006 Titus et al (Gene 371, 211-223) mapped the fanca gene to LG25 using the HS  ...

OTHER MAPPING INFORMATION
Chr 25 Titus et al., 2006 Titus et al (Gene 371, 211-223) mapped the fanca gene to LG25 using the HS mapping panel. BLAST  ...
Chr 25 Dildrop et al., 2004 Dildrop et al (Dev Genes Evol 214:267-276) used zebrafish genome sequence to map the irx3b irx5b  ...
Markers Encoded by irx3b
fb36a07 Chr: 25 Details