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General Information
ZIRC
ZFIN ID: ZDB-GENE-021226-3

Mapping Details

Gene Name: laminin, gamma 1
Symbol: lamc1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position
ZFIN Gbrowse 2 35,880,600 - 35,979,178
Ensembl 2 35,880,600 - 35,979,178
Vega 2 35,898,143 - 35,996,721
NCBI Map Viewer 2 35,880,600 - 35,979,095
UCSC 2 -
Mapped Clones containing lamc1
CH211-194I4 Chr: 2 Details
DKEY-161L11 Chr: 2 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
hi1193Tg 2 35,924,004 - 35,924,005 GRCz11 ZFIN Curated Data
hi2557Tg 2 35,880,992 - 35,880,993 GRCz11 ZFIN Curated Data
hi3890Tg 2 35,900,512 - 35,900,513 GRCz11 ZFIN Curated Data
hi4131Tg 2 35,933,682 - 35,933,683 GRCz11 ZFIN Curated Data
m86 2 35,939,841 GRCz11 Parsons et al., 2002
m466 2 35,881,007 GRCz11 Parsons et al., 2002
sa379 2 35,954,454 GRCz11 Busch-Nentwich et al., 2013
2 35,971,997 GRCz10 Busch-Nentwich et al., 2013
2 35,675,287 Zv9 Busch-Nentwich et al., 2013
sa9866 2 35,971,297 GRCz11 Busch-Nentwich et al., 2013
2 35,988,840 GRCz10 Busch-Nentwich et al., 2013
2 35,692,130 Zv9 Busch-Nentwich et al., 2013
sa19814 2 35,955,923 GRCz11 Busch-Nentwich et al., 2013
2 35,973,466 GRCz10 Busch-Nentwich et al., 2013
2 35,676,756 Zv9 Busch-Nentwich et al., 2013
sa30600 2 35,967,988 GRCz11 Busch-Nentwich et al., 2013
2 35,985,531 GRCz10 Busch-Nentwich et al., 2013
2 35,688,821 Zv9 Busch-Nentwich et al., 2013
sa39876 2 35,965,952 GRCz11 Busch-Nentwich et al., 2013
2 35,983,495 GRCz10 Busch-Nentwich et al., 2013
2 35,686,785 Zv9 Busch-Nentwich et al., 2013
la023638Tg 2 35,602,191 - 35,602,201 Zv9
la023639Tg 2 35,648,924 - 35,648,934 Zv9
la028800Tg 2 35,646,031 - 35,646,041 Zv9
la028801Tg 2 35,648,212 - 35,648,222 Zv9

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
elavl1a GENE 2 Parsons et al., 2002 Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.
z7632 SSLP 2 1.8 cM Parsons et al., 2002 Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.
z11023 SSLP 2 1.6 cM Parsons et al., 2002 Parsons, et al. (2002. Dev 129:3137-3146.) report using half tetrad analysis to map lamc1 to LG2. They localized lamc1 to a 3.4 cM interval between z11023 and z7632 on the MGH mapping panel. The elavl1 gene is within this interval and was used as a starting point for a chromosome walk. lamc1 was found to be on YAC 148F11, approximately 1.6 cM from z11023 and approximately 1.8 cM from z7632.

OTHER MAPPING INFORMATION
Genomic Feature ti263a is an allele of lamc1
Chr Location Mapped As Panel Mapped By Scoring
2 48.8 cM ti263a Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.