ZFIN ID: ZDB-GENE-990415-9

Mapping Details

Gene Name: activin A receptor, type 1 like
Symbol: acvr1l
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 2 41,524,238 - 41,543,762 GRCz11
Ensembl 2 41,524,238 - 41,543,762 GRCz11
Vega 2 41,674,898 - 41,694,422 GRCv10
NCBI Map Viewer 2 41,524,235 - 41,543,760 GRCz11
UCSC 2 - GRCv10
Mapped Clones containing acvr1l
CH211-62C1 Chr: 2 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
gl2 2 41,534,843 GRCz11 Hogan et al., 2006
m100 2 41,532,847 GRCz11 ZFIN Curated Data
sa2068 2 41,526,867 GRCz11 Busch-Nentwich et al., 2013
2 41,677,527 GRCz10 Busch-Nentwich et al., 2013
2 41,580,791 Zv9 Busch-Nentwich et al., 2013
sa18736 2 41,534,268 GRCz11 Busch-Nentwich et al., 2013
2 41,684,928 GRCz10 Busch-Nentwich et al., 2013
2 41,573,390 Zv9 Busch-Nentwich et al., 2013
sa38350 2 41,530,363 GRCz11 Busch-Nentwich et al., 2013
2 41,681,023 GRCz10 Busch-Nentwich et al., 2013
2 41,577,295 Zv9 Busch-Nentwich et al., 2013
sa39902 2 41,537,309 GRCz11 Busch-Nentwich et al., 2013
2 41,687,969 GRCz10 Busch-Nentwich et al., 2013
2 41,570,349 Zv9 Busch-Nentwich et al., 2013
tm110b 2 41,530,550 GRCz11 ZFIN Curated Data

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
2 148.5 cM alk8_sum Mother of Pearl (MOP) Postlethwait, John H. Data
2 494.21 cR ALK-8 Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
2 3361.0 cR alk8 Goodfellow T51 (T51) Geisler, Robert Data
2 107.7 cM alk8 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
tm110b Feature 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z9234 SSLP 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z17291 SSLP 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
m100 Feature 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z4586 SSLP 2 2.3 cM Payne et al., 2001 Payne, et al. (2001. Mech Dev 100:275-289.) report mapping alk8 to LG02 on the MOP panel using a number of markers. The markers and distances between them are z4586-(2.3cM)-alk8-(4.76cM)-12L400-(3.64cM)-10F950-(3.64cM)-z1406.
12l400 RAPD 2 4.76 cM Payne et al., 2001 Payne, et al. (2001. Mech Dev 100:275-289.) report mapping alk8 to LG02 on the MOP panel using a number of markers. The markers and distances between them are z4586-(2.3cM)-alk8-(4.76cM)-12L400-(3.64cM)-10F950-(3.64cM)-z1406.
10f950 RAPD 2 8.4 cM Payne et al., 2001 Payne, et al. (2001. Mech Dev 100:275-289.) report mapping alk8 to LG02 on the MOP panel using a number of markers. The markers and distances between them are z4586-(2.3cM)-alk8-(4.76cM)-12L400-(3.64cM)-10F950-(3.64cM)-z1406.
z1406 SSLP 2 12.04 cM Payne et al., 2001 Payne, et al. (2001. Mech Dev 100:275-289.) report mapping alk8 to LG02 on the MOP panel using a number of markers. The markers and distances between them are z4586-(2.3cM)-alk8-(4.76cM)-12L400-(3.64cM)-10F950-(3.64cM)-z1406.

OTHER MAPPING INFORMATION
Chr 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put laf^tm110 between the  ...
Markers Encoded by acvr1l
fk50h05 Chr: 2 Details
Genomic Feature gl2 is an allele of acvr1l
Marker Type Chr Distance Publication / Person Comments
z1406 SSLP 2 3.8 cM Hogan et al., 2006 Hogan, et al. (2006. Curr. Biol. 16:506-511) reports mapping gl2 to LG2, 3.8  ...
Genomic Feature tm110b is an allele of acvr1l
Marker Type Chr Distance Publication / Person Comments
z17291 SSLP 2 2.1 cM Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z9234 SSLP 2 1.0 cM Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z20629 SSLP unknown 1.8 cM Mullins, 1999
m100 Feature 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
acvr1l GENE 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
Genomic Feature m100 is an allele of acvr1l
Marker Type Chr Distance Publication / Person Comments
acvr1l GENE 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z9234 SSLP 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
z17291 SSLP 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
tm110b Feature 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put  ...
Genomic Feature m100 is an allele of acvr1l
Chr 2 Bauer et al., 2001 PCR analysis of genomic DNA from laf mutant F2 embryos for SSLP markers put laf^tm110 between the  ...
Genomic Feature tm110b is an allele of acvr1l