Phenotype Summary

Phenotypes

Publication	Data		Phenotype
Xu et al., 2018	Fig. 1		pharyngeal arch 1 foxc1a expression absent, abnormal pharyngeal arch 1 foxd2 expression increased distribution, abnormal pharyngeal arch 1 foxf1 expression decreased amount, abnormal pharyngeal arch 2 foxc1a expression absent, abnormal pharyngeal arch 2 foxd2 expression increased distribution, abnormal pharyngeal arch 2 foxf1 expression spatial pattern, abnormal
	Fig. S2		pharyngeal arch 1 foxc1b expression decreased amount, abnormal pharyngeal arch 1 foxd1 expression decreased amount, abnormal pharyngeal arch 1 foxd1 expression decreased distribution, abnormal pharyngeal arch 2 foxc1b expression decreased amount, abnormal pharyngeal arch 2 foxd1 expression decreased amount, abnormal pharyngeal arch 2 foxd1 expression decreased distribution, abnormal
Askary et al., 2017	Fig. S4		opercle increased variability of size, abnormal
Barske et al., 2016	Fig. 3		pharyngeal arch 2 barx1 expression decreased amount, abnormal
	Fig. 6		pharyngeal arch neural crest cell prrx1a expression increased amount, abnormal pharyngeal arch neural crest cell prrx1b expression increased amount, abnormal pharyngeal arch ventral region prrx1a expression increased amount, abnormal pharyngeal arch ventral region prrx1b expression increased amount, abnormal
	Fig. 8		pharyngeal arch 2 ventral region barx1 expression decreased amount, abnormal pharyngeal arch 2 ventral region prrx1b expression increased amount, abnormal
	Fig. 9		pharyngeal arch 1 ventral region decreased amount, abnormal pharyngeal arch 1 ventral region decreased size, abnormal pharyngeal arch 2 ventral region decreased amount, abnormal pharyngeal arch 2 ventral region decreased size, abnormal pharyngeal arch cartilage ventral region decreased amount, abnormal pharyngeal arch cartilage ventral region morphology, abnormal pharyngeal arch ventral region barx1 expression decreased amount, abnormal pharyngeal arch ventral region dlx5a expression decreased amount, abnormal
Askary et al., 2015	Fig. 1		pharyngeal arch 2 joint irx5a expression absent, abnormal pharyngeal arch 2 joint irx7 expression absent, abnormal
Kamel et al., 2013	Fig. 7		hindbrain fzd7a expression absent, abnormal pharyngeal arch frzb expression absent, abnormal pharyngeal arch fzd7a expression decreased amount, abnormal pharyngeal arch nkx3-2 expression absent, abnormal pharyngeal arch wnt9a expression absent, abnormal
Choudhry et al., 2011	Fig. 2		Meckel's cartilage bent, abnormal Meckel's cartilage fused with palatoquadrate cartilage, abnormal Meckel's cartilage protruding, abnormal palatoquadrate cartilage fused with hyosymplectic cartilage, abnormal palatoquadrate cartilage increased length, abnormal symplectic absent, abnormal
Zuniga et al., 2011	Fig. 7		pharyngeal arch 1 malformed, abnormal pharyngeal arch 2 malformed, abnormal
Zuniga et al., 2010	Fig. 6		branchiostegal ray decreased size, abnormal ceratohyal cartilage absent, abnormal ceratohyal cartilage decreased size, abnormal Meckel's cartilage absent, abnormal Meckel's cartilage decreased size, abnormal opercle increased variability of size, abnormal symplectic absent, abnormal symplectic decreased size, abnormal
Nair et al., 2007	Fig. 3		ceratohyal cartilage aplastic, abnormal Meckel's cartilage decreased size, abnormal ventral mandibular arch aplastic, abnormal
Phenotype Annotation (1994-2006)	Fig. for (tf216b)		mouth quality, abnormal pharyngeal arch 3-7 skeleton quality, abnormal splanchnocranium quality, abnormal whole organism lethal (sensu genetics), abnormal
Walker et al., 2006	Fig. 3		ceratohyal cartilage aplastic, abnormal mandibular arch skeleton joint absent, abnormal Meckel's cartilage decreased size, abnormal palatoquadrate cartilage decreased size, abnormal
Kimmel et al., 2003	Fig. 2		ceratobranchial 5 bone decreased length, abnormal ceratobranchial 5 bone malformed, abnormal cleithrum decreased length, abnormal cleithrum malformed, abnormal dentary malformed, abnormal maxilla malformed, abnormal opercle cartilaginous joint distended, abnormal ossification disrupted, abnormal
	Fig. 3		dentary curved caudal, abnormal dentary fused with maxilla, abnormal dentary malformed, abnormal maxilla curved caudal, abnormal maxilla malformed, abnormal ventral mandibular arch orientation eye, abnormal
	Fig. 4		opercle cartilaginous joint distended, abnormal opercle cartilaginous joint increased thickness, abnormal opercle increased size, abnormal
	Fig. Table 1		branchiostegal ray decreased size, abnormal opercle size, abnormal
Miller et al., 2003	Fig. 3		embryonic viscerocranium morphogenesis disrupted, abnormal pharyngeal arch 1 joint physical object quality, abnormal
	Fig. 8		embryonic viscerocranium morphogenesis disrupted, abnormal mandibular muscle wholly dorsalized, abnormal
Miller et al., 2000	Fig. 1		embryonic viscerocranium morphogenesis decreased process quality, abnormal hyosymplectic cartilage fused with ceratohyal cartilage, abnormal palatoquadrate cartilage fused with Meckel's cartilage, abnormal
	Fig. 5		embryonic viscerocranium morphogenesis decreased process quality, abnormal pharyngeal arch 1 mesenchymal cell physical object quality, abnormal pharyngeal arch 1 ventral region physical object quality, abnormal pharyngeal arch 2 mesenchymal cell physical object quality, abnormal pharyngeal arch 2 ventral region physical object quality, abnormal pharyngeal arch 3 mesenchymal cell physical object quality, abnormal pharyngeal arch 3 ventral region physical object quality, abnormal pharyngeal arch 4 mesenchymal cell physical object quality, abnormal pharyngeal arch 4 ventral region physical object quality, abnormal
	Fig. 6		embryonic viscerocranium morphogenesis decreased process quality, abnormal pharyngeal arch 1 mesenchymal cell physical object quality, abnormal pharyngeal arch 1 ventral region physical object quality, abnormal pharyngeal arch 2 mesenchymal cell physical object quality, abnormal pharyngeal arch 2 ventral region physical object quality, abnormal pharyngeal arch 3 mesenchymal cell physical object quality, abnormal pharyngeal arch 3 ventral region physical object quality, abnormal pharyngeal arch 4 mesenchymal cell physical object quality, abnormal pharyngeal arch 4 ventral region physical object quality, abnormal
	Fig. 7		branchiomeric skeletal muscle development decreased process quality, abnormal head lacks all parts of type ventral intermandibularis anterior, abnormal head lacks all parts of type ventral intermandibularis posterior, abnormal hyohyoideus decreased length, abnormal interhyoideus decreased length, abnormal interhyoideus physical object quality, abnormal pharyngeal pouch 1 physical object quality, abnormal stomodeum mislocalised ventrally, abnormal ventral intermandibularis anterior physical object quality, abnormal ventral intermandibularis posterior physical object quality, abnormal
Kimmel et al., 1998	Fig. 10		cartilage morphogenesis disrupted, abnormal ceratohyal cartilage decreased size, abnormal ceratohyal cartilage morphology, abnormal interhyal-epihyal joint absent, abnormal Meckel's cartilage decreased size, abnormal Meckel's cartilage morphology, abnormal opercle aplastic, abnormal pharyngeal arch 1 position, abnormal pharyngeal arch 2 position, abnormal
	Fig. 9		cartilage morphogenesis disrupted, abnormal ceratohyal cartilage decreased size, abnormal ceratohyal cartilage inverted, abnormal ceratohyal cartilage structure, abnormal interhyal-epihyal joint absent, abnormal ventral hyoid arch morphology, abnormal
Piotrowski et al., 1996	Fig. 2		ceratohyal cartilage decreased size, abnormal hyosymplectic cartilage increased width, abnormal Meckel's cartilage aplastic, abnormal Meckel's cartilage decreased size, abnormal Meckel's cartilage mislocalised posteriorly, abnormal mouth concave 3-D shape, abnormal neurocranium morphology, normal palatoquadrate cartilage decreased size, abnormal pharyngeal arch 3 skeleton decreased length, abnormal pharyngeal arch 4 skeleton decreased length, abnormal ventral mandibular arch decreased size, abnormal