Genomic Feature

sou2

ID
ZDB-ALT-201023-1
Name
sou2
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Bao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 30333637 - 30333640 (GRCz11) (1) Details
Nucleotide change
CTGC/-
Variant Notes
A deletion of 4 bases (CTGC) at the CRISPR target sequence  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 9 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TAAACAGGTGTAGCCAATTAAGTAGCTAGTGAGTACACTGTAAAAGTGCACTGTAACTTAACATTTACAATCTAAAACCACAGCACAGTTGTAATTGTTAATTTACAGTGTGCTTGTCAATTTTTCCTGTAATACTGTAAAAATTCCAGTAATACTTTCCAATAATACTGTAAAAATTGCCAGTAATACTGTAAAATTTACAGTGCGCTTGTTAATTTTTCCAGTAGTACTGTAAAAATTGCCTGTAATACTGTAAAATAAACAGTAATACTGTAAAATGTACAGTTCGCTTGTACATTTTACAGTATTACTGGTATATTTTACAGAATTGCTGACAAAACTTACAAGCACATTGTAGATTAACAAGTACAACCAGAATTGCCAGTAATACTGTACATTTTACTGTAATTGTTACATTGCATATTTGCTAGTCACACAGTTTTAACTCTTTTTCAGGTATGAGTGGTTTAAGGATTTGAACCTGCGTTGGTATGCATTGC
CTGC/- GGTGTCCAACATGTTGCTGGAGATTGGTGGTCTTGAATTCCCAGCATGTCCTTTTAACGGTTGGTACATGGGCACTGAGATTGGAGTGAGGAACTTCTGTGATACCCAGCGCTACAATGTTCTTGAGGTGCTTCTTATTGCTTGTTTTTTTATACAATAGTGTTTATAAGTTCTTTAGTAGTCTTGCTTTCTGCTGTCTTATGGCCTGCAGCACGTTGGCCGTCAGATGAGCTTGGAGACTCAAAATCTGTCCTCGCTATGGAAGGACCAGGCTCTGGTGGCCATTAATGTAGCAGTCATGCATAGTTATCAGGTAAGGTGGATCTGAATAGCAGGCTTTGGCTTGGGACAGAGGATTCCTGATCTCATTAGTAAATATATATTTTCGGGGGCGTAAGCAGTATTTTCAAAAAGTATCAATTGAGAGTACATGATTTTTTTAATTTTTTTATTTCTATTTTATTTTGTTAAGCATGAAGGTCTACACTTAAGCCTAATAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations