Genomic Feature
vp34rc1
- ID
- ZDB-ALT-200310-2
- Name
- vp34rc1
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Parichy Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| This mutation was created in fish doubly homozygous mutant for thraa (vp33rc1) ... | Saunders et al., 2019 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 19: 17524376 - 17524418 (GRCz11) (1) Details
- Nucleotide change
- GCTTTGTCTCCACAAACAACACACAGCTCATCCTTGTCCAGGT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 43 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
ACTGACTGACTGACTGACTGACCGACACCCCCACACACCCCTATCCCTCAACCCAACCAATAATGTTTTAAAACGCACAGATTTACCTGTAACCACCCACTTCCCTACACCCAACTGACAGTGTTTTCCTAAAAAAGATAAGCCCTTATAGTAGCCAGATTTTACCACATTTTCACGCTCTTATTTACTAGTTTGTTTTACCTTTCTTTCTGAAACTATCATGCTCAACTCCGCTCTGCATCTCAAATCCTCCAACGTACACAGCAAGCCACTGGACAAACTGGTAACAGCTGAGTTGCGCACAAAGAAACGGCGTCATACCACCCCGTAGCATTCATTTTAAAGATGAAACGCATCCATATGTTTCTCTGGCTACATAATTTGCTATCTCCAGAAATAAAGGAGTACGTTTTCAGAATAAGCCAATGTTGCATAGGGCAAGAGAAAAAAAACTCACTTTGCAGCCCTCACATGTAATGCAGCGATAGTGATAACCAGTT
GCTTTGTCTCCACAAACAACACACAGCTCATCCTTGTCCAGGT/- AACTTGGTATGTACCCTGTTAGAGTAACAAACACAACCCATTAAAACGAAACACTTGTCATAACACCATAATAATCATGACATGATTCATGTAATAAATATGAAACAGATTTTATTCTTTATTCTGCATTCTTATGAAAACTTTATGTTAAATGTCAATCAGTTTATGTCATTTTAAATGCAAAGATGACTGATTTATTGAGATGTCTTTTTCATGACAACAAAACCTGTTAGTGTCTTAGTCATGACAATGTGACATTACCAAGACAACAGACCTCGTCATAAATCTGTTATGAACATGATTGTTATGATGAGGCTATTCTACTGTAATTTTGTATGAATATTTTTCAAATCACTTATTTTTTCCAGTGGAACAACTAAATACGTAATTTAATGACTCATTAAAAGTGCCAATACTCTTGTCAAATAATTTTAAGCATCATTTTAACAGCATCATTGATATTTTTCATGATCTCTACAATAGTGGTACAAATTTTATTT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None