Genomic Feature

hg93

ID
ZDB-ALT-200204-5
Name
hg93
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sood Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 71327244 - 71327251 (GRCz11) (1) Details
Nucleotide change
GACCTCCT/-
Variant Notes
Deletion 8 bp in exon 3, cDNA: 566_573delAGGAGGTC, p. Gln189ArgfsX10
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GCAGCAGAAGTCGTCATAGTTGGTAAACTTTTAGTGCAGTAAACGAGAGAGTGCAACAAATAATTGTTTTAAAATCCTATTTGCTAAAAAAAGAAAAGAAAAACTCCACAATGGTGTTATCACGACTTTCAGAAAAAGGAAAACGATAGTGTGAGACTGATAACTGTAGCCAGAAGAGAAAACAACATCCGATTTACTGTCCTGCCCCCATACGCGCTGCATTTCAACACCCTCGTACAAATAGTCATTTGTTTTTAGTAACTTTACGCAAAGATGATGTAATACAAACACAATTACAAATAAAAGTTAAAGCATTTTTATATCACAATATTAAAAACGTTCAAGTATTCAAGATGCTGATGACTATTACACGCGTCTTGTGAAAAGGGTGCATTGACTTCCACTTTATTGAAGGCTCATGACACACATCATTTGAGAGCAATGACTTACTTTAGTATGGTCTTTGCAGAGCTACAGTCCTCGAATCTGATGGAGTATCC
GACCTCCT/- GACCCAGCATGACATCCATCTCATCTGCCACTCTCTGAGCCACACTCATGGCTGCCACCCTTCTGGGCTGAGTACAGGCCACGCCGCGCTTCGGGCCAGGCAGAGACCTGACCATGTCAACACACCACTGAGGGATCTGAAAAACAACAGTCCAAACATCCATTAAAAGCTCCTTATTGTGGTTTTATTAAGCCTTGTGTGCTGTTGGGGATGTTTTTAATCCAATCTGGGGGGATTTTGAGACTTAATTTGGCCACAACCTTCTCAGTGTTTCAGCAAATGGAATGATTTTTGGTAATTAATCTTATTTTGACATATTTTGGGAAAACACTTTGAAAATTTTCAAAAACTGAACTTTTAATATACTCTAGGCAAATTTACTACACTTTCATTATGTTGGTGGCTGTTTTTGACCCATTGATTTCCATTATAATGACGTTTTGTGATTGCAAAGTCATGACTAGGTGTATTCTTTATTCTTGGTGGTTTTCCCTGTTGGG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations