Genomic Feature

bgu1

ID
ZDB-ALT-190823-2
Name
bgu1
Synonyms
  • map11-KO line (1)
  • Z14 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Birnbaum Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 7: 26380280 - 26380281 (GRCz11) (1) Details
Nucleotide change
GC/TGGCGTTTAAACCTTAATTAAGCTGTTGTAGGCG
Variant Notes
The 34 nucleotide insertion and 2 nucleotide deletion is predicted to result in  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
34 bp inserted / 2 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TCCTGATAAATGGTTAAAGTCAAAATGAAATTAAACCAAGTAATTTTTTGTTTTAAATTTGCAGTTTAAAAGCTTTGTAAAATTAAAGTTAAAAGATGATTAAACTTCTGCTTACAAAAAATAATGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATAATTTTTTTTTTTTTGTTATTTTCTGTCTAAAAACCTCAAAGGTAAATTTGGCAAGAAATATGAGATTGTCAAAGCAAAATATGAGAACTAATAACCTCCAAAAAGTTACACACTAAAATAAACCTTCAGAACCTAAGGACTGTTAAATTGAGTAACTTTTTTTCTGTTGATGACTGAGACCAGCTACTCTGACAACAATTTAATGAAGTAGAGGGGATGGTTTTTATGTGCACTTCTTTCAAAATTTTGGAATTCATCATTGATTTAACAAGTGTGTGAAGTCCCACATTTCTCCCTTACCAAACATTGTCCACCA
GC/TGGCGTTTAAACCTTAATTAAGCTGTTGTAGGCG AGCACTGATCCATCTGGCATCATCGGTAAGTACGAAGCATTAAAGTTGGGTAGGATCTTGACATCACGCACACACACTTCCTCTTGCGAGCTCCCGTTTAACACTGAAACAGTCAGATGTTCATATCTACATAAACAGGATGTCTGTCACATAAAGATACAGGAAACCATGAAGATCAAACAAAGGGTTAATCCAGAGCACCTATTGTCTGACAGTTGAAACATTCTACAGCAAATTCACTATCGCAAAACTTTGTTTAGGACTTTGAATGAAACAAGTATTATATTTTTCCATATGTAAAGTACTTAAACATTTTTGACAGATTAAAAGAAAGAACAATATAAAAAGAGTCATACATGCATTTCAAAATGCACAAACAAACAGTGCATCCTGACAATATTCACAGCTATTGACTTTTTCAATAATTTACTATGTTAATAAAAGCCACACTTAATTATAACAAATTAACAATTATATGCATAGTTTCTACAAACAGTACT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations