Genomic Feature

nuz2

ID
ZDB-ALT-170726-2
Name
nuz2
Synonyms
  • nuz101 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Detrich Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 1: 26669483 - 26669487 (GRCz11) (1) Details
Nucleotide change
AGATG/-
Variant Notes
The deleted sequence is: AGATG.
Deletion of 5 bp from position 2187 to 2192 in REFSEQ: accession XM_700557.7
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted from position 2187 to 2192 in RefSeq:XM_700557.7 in Exon 3 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GACAGAGATCTTTTGAAGAAACGAAAAGCAGAGGCAGAAGAAAAAGCAACCAACCAGTGGGTTTATGGGTAAAGATAGTGTTAAACGAGGCCAATAAAAGAACTGGAAGGGCTACTGAGCCATGATTATTTACTTTTCAATTCATATCACATTGTGATACTGTGATGCACCATGCATATATGTGGTGTAGTCATTCAAATAATGTCTCCTAACATTGACCGCAGGGCACAGAGCATTAAAAGAGTCAAAAAGAGGACCACTACTGGCACTCCTGGAAGGAAAGGTCGACCAAGAAAAGAACCAATAGTTATTGCAGAAGACCTTGGTCTGGCTCAGGAAGTGGATCCTTCTCCCATCACAATTCCTGTCACAGAACCTGAATTGCCCACAATAGCAGAGATAGAGCCTTTGCAACCAGTTGAGCCACAACAAGAACTGGTGCCTGAAGAAGCAATAAGTGAAAAACCTCAAGAGGAGTTTTTGATTGAGGATCTGGGGCC
AGATG/- AGGAGGAAGATATGCCTCAAAAACACCTGGTTATCGATACAGGTATTTGCTGAAACGTCTTGTTCATGAATGATCTCCAATAATTTCTGGGTGATTCACATCAGAACAAATGATTGTCCATTGTGTATTTTTAGGAGACGACGAGAAGCCATATAATGATGTGCCTGAACAGAGCTCAATTGCAATTCCAATGTTTGCTCCAGCACCTGATTCTTCTCAACCAGATAACCTAAGCCTTACTGAAAATTTACTTTTCTGAGCACCTCCTTACTATGGAAACAATAGGATTGTGGCTAACTCATTTAATACATTTTATCTCAAGGGATTTTAAAACCTGAAACAATAACAAATGTATATTTATTCAAATCCTTAATGTTTTCATGTACATATGCCAATCGTTATTACTTCCAGTCAAATACAAACATTAACTAGATATATTAAGAAAGAATTGTTTGTTAGTTGTTACATTAAGGTACTTTTGTGCCCCCTAGTGATTGTAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations