Genomic Feature
mde150
- ID
- ZDB-ALT-170607-11
- Name
- mde150
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Schmid Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 6: 45946212 - 45946258 (GRCz11) (1) Details
- Nucleotide change
- ATGCACTGAGACACTGGGCTCCGGAAGCGCAGACCACAAGCCCCTGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 47 bp deleted in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GCATATTTACTGTACAAAACCTGTCAGTGAACTGTGAGGGCAAAAAAAAAAAAAAAAAAATTTAATTGTAATTTTTAATTAATTGAGATCTTGATTTTAGGCCAAATCGCCCAGCCCTATTTCCTACCACTGCTCTCTTGCTTGTCTGACTTGCTGTAATGTTCAAATTTAAATTAATCAGAGGTTTTATTCTATTTTTTTGCCACCTATGCCAAGCTGTTTTAACACAACCTACATTTTAAAAAGCACAACAGAAATAAAGATGAACTGAAAACTGTGACCATGCATTAGAGGAGAAAAAGGTAGATTATAAATGATATTTTATTTTTTAAAGTGTGCAATTGTGCATGTTTTCAGGATGCTTTCTAAAAACATTTTTTAAATTGGGCTTAGTATATTAATTGTACCACATACCTTTTGGGTAATTAACCACATAGACTAGGTTTCCCCAGCCGTTCTCAGGTGCATGCAGAATGCCGTCCACCAGACGAACCCCCCTC
ATGCACTGAGACACTGGGCTCCGGAAGCGCAGACCACAAGCCCCTGG/- AAACTGAGCGGACACTGTGGAAAGCAAAACCGTGCCATCATCCTCTGACGGGATCTCCATCGGCTCCTCATTCTCCTCCTCCGCAACTCGAATGTACATCTCGGCCATCTTTCCTCAGTCGAGCTGACGGTGAATGAATAGTAAAATTATTGTTTCCATTAGCCAAAAAAGACAAAAACAAAAAAGACAGTAATATCTCATAAAAAATGACCATAACAAAATATGCAAAAAAAACTAAAAGCAAAATGTTTAAATTCACAGCACTCATTTAAAAAAAAAACTTAGATTGGTCGTGAGATCCGAATTAGTAAACAGAAAATAAATGCTTTTGAGAAATCCTTCTGTTTGCAACAGTTTCAACTTTCTTTTTATTCGTACAGAAAACTACAATACACATAAAAACTAATAATGATGATGATGCTCTACAGAAAGTTACCAACATTTCTGCTATTAAGGTACTTTAATATTCGATTTTGTTTTTGTATACGTATACATACACA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None