Genomic Feature

s980

ID
ZDB-ALT-160812-3
Name
s980
Synonyms
  • bns980 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Stainier Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 7246661 - 7246663 (GRCz11) (1) Details
Nucleotide change
GGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
3 bp deleted in Exon 3 (1)
Transcript Consequence
Inframe Deletion (1)
Protein Consequence
Amino Acid Deletion: 1 AA missing at position 50 (1)
Sequences
Flanking Sequence
ATTATATGCTGTCATGGCTTTGCAATCAAAAAATGTCAATATAATGGAAGTCAATGGGGAAAACAGTCAGTAGCATAACAAAAGAGTAGTCAGTTTAAACAGTACACAAGGGTTAATATACATATAAATGCATTTGGTCCACTTTATTTAATGATTTCTATCACAATATGAAGAAAAGACATTCAAGCAGCATAACAAAAAAAAAAATCTGAAGACAACTATCGCACCTTTAAATCGATATGACCTTTGATTTACCTTGGTTGCAGTTGTGTGAATGCATGCGCCTCCACCCCGGACAGCATTCTGGGTAAATTTGTAGATTAGGAGCTGCTCTGCTCACCTGCCTATAAGAAACCTTGTAGATGGTCCTGTAAAACACGCAATACAGTGAGTTGATGGTGCATGGTACGGTTTTGATATGTGTTTTCCTGTGCTGTTCTTACTTGTACGTGCTGCACATGCGGTGGTTTTGGCACATGGTGATGTAGGGTTTGTGTACA
GGC/- TGAAGAAAAGACTCTGTGCTGTAAGACACGCGACGACTCCAGACATCACCAACACACACTCTCCTCCTGAAACACACACATATAAAGCGGGGAAATTAAGTATTAAACACGTCACCATTTTTCTCGGAAAACATATTTCTCAAGGTGCTGTTGACTTCCATATTTGCAAAGAAAACTAATCTTATTACAAATTAAGTAATGCATAATAAGATGAAAGGACGCAGGGAAAAAGTATTGAACACATGAAGAAAGAAAGGTATAGAAAGGCAGTGAAAGCCCAGACAGCAGCTGAAATCTTTCAGTAGTTCTTCAGCAACCCTCTGCCCTGCCTCATTGTAAAGTAATATTAGCTGCTTTAGTCCAACATCTACATTAGCAGGATGATGAAGATGAAACCAGAGTGGACATTTCAGCAAGACAATGATCCAAAACACAACCAAGGAAACTCTCAAATGCTTTCAGAGAAAGAAAATTAAGCTGTAGAATGGCCCAGCCAATCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations