Genomic Feature

ca22

ID
ZDB-ALT-160809-1
Name
ca22
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
embryos treated with
Lab of Origin
Childs Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Point Mutation
Variant Location
Chr 20: 26690568 (GRCz11) (1) Details
Nucleotide change
A/G
Variant Notes
premature stop in the conserved FOX DNA binding domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
A>G in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ACGAACTCAGTCTTTCCATTTCGTTCTCAAAAAGGGATTACAGCCGCCAGGATTAGCACGAAACTGTGAAACTGAAAACGGTGATAACGACCACGAATACGCATGTTGCTTGGATATTTTTTCGCACAAACAGCAGGCTTTTTATTTGCCACACCACTCCACGCCGTACAGAAGACGGTCACATTTATGTCGGATGCGTGATGCTTGTATTATTACAGGTTTTCAGCTGAAGCGAGGCGTTTATCCTCAGTTGTTTTTTCTTAAAAGTCGTTATTGGTTGTCGATCGATCCTCTAGGGTTTGCTTTACCTTTTTCTTCAGACAACGGGCTGTTTTCGTACGTCACAGCTGGACCGATGACGACTGAAAGCTCTCACGGACCCCTGGGGTCGACGCCCCCGACAAGGACCAGTCCAGCGACCACCGCGCTGCATCCAGGACTGATGAACTCGACAGGTAACTTGGAGGAGCATAGCGCAGTGTCAAAGAGTAAAAAGACCA
A/G CTCAGGTCTGCGACGCCCGGAGAAACCGCCCTACTCCTACATTGCTCTCATTGTGATGGCAATTCAGAGCGCACCAACCAAAAGACTGACACTTAGTGAGATTTACCAGTTTTTACAAACACGCTTCCCGTTTTTCCGAGGCTCTTATCAGGGCTGGAAGAACTCTGTTCGGCACAACTTGTCTCTGAACGAGTGCTTTATAAAACTACCAAAAGGTCTTGGGCGACCGGGTAAAGGACACTACTGGACCATAGACCCAACAAGCGAATTTATGTTCGAGGAAGGGTCATTTCGGCGAAGACCCCGAGGATTTAGGAGAAAATGTCAGGCTATGAAACCAATGTACAGAATGATGAACGGCCTAGGGTTCGGTTCCGCCATTTTACCTCAGAGCTTCGACTATCAATCGCCTACCGGTGCACTTGCGTGCCATAGCAGTGGCTATAACTTGGACCTGTCCGGCAGTGGATATGAATCAATAAGCAGTGGTCACCACGGCC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations