Genomic Feature

ama605003

ID
ZDB-ALT-151110-5
Name
ama605003
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
UMS AMAGEN CNRS INRA (Closed)
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 34050422 - 34050423 (GRCz11) (1) Details
Nucleotide change
TC/-
Variant Notes
Radev et al (2015): Talen pair targets the junction between exon and intron 14;  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted (1)
Transcript Consequence
Exon Loss of Exon 14 (1)
Protein Consequence
None
Sequences
Flanking Sequence
CAGCCTGTTAAAGGTCTAGAACCGGTGACGTTCTTGCTGTGAGGCGACAGTGCTAATCACTGGGCCACCGTGCTGCTCCATGGAGGGAAAGGTGAAGAGGTAGGGGTGGAAGGGGGGATTCTTCAAATCGAAGATGACTGTAGTGAAAAAACCCTGGCTCTTTATAATGGGTTAGGAATGGCCCGATTGGTGGATCATGCATGCTAATGCAGAACCAGCCGCGTTCAATCATAATCACGTGCTCCTCTCGAAATTAGTTTATGAATAAACTTCACTTAATACTTTATATAAAAGTTTTTTTTTTTTTTTTTGGTGATGGCAGCTTAAAGACGCCTCTCATATGGAGAATAAAGTCACGTGCATTGCTCAGATGTGAGTTGCTCAGACATATCATAGGAAAATACTTTCAAACAACACACCTTTGCTTTATATAGACACAGTGATATCTTAGATTCAGACTAATTTCATTTCTACTTGACTTCATTAGGTAACAGTAATAC
TC/- ACATCTGGCCCTGGTGACCCTTTACAGCCTGGAAGTCCAGGGAATCCCGGCTCGCCCTATGAAATATAATACAAACACACAAAACGTAAACACTCTTCTTCATGGTGGCAGTCAAACGCAGTGTGGAGTCAAACACCCTGAACTGCATGTAATCAACTCCAGGGTGACATCATCACGCCAAGAAAAGTGAAGAAATATACTGAGGAAAAAAGCCAGACCGAGTGAAAAAGAGACCGAAAATAACAAGAAAATGAGATGATCTTTGAATGAAGACGGAGTGATTTGTTAAATGAAACATTACAGTACATGTTGAGAGCTAATTGAGGACAAAGATGAAGAAAATAAAGCAGAAATGGAATAAAGTGTCAGACAGACAACTGATATAATCATGCAACAGTTTATGCATCTATTGTTTATCTGCTGTTAATCTGAAATCTGACACAGGGCATCAGAGAAAGCAGCGGAGGAAGAAGAGAGAAAATAAGGTCAAATGTTAAAGT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations