Genomic Feature

i278

ID
ZDB-ALT-140522-1
Name
i278
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Ingham Singapore Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 17: 32862736 - 32862745 (GRCz11) (1) Details
Nucleotide change
TCAAATTGGG/-
Variant Notes
van Impel, et al. (2014): The prox1a^i278 allele harbors a 10 bp deletion in  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TCTGCTCCCGAATAAGTGCGCGTGCTCGATCCAAAAAGTGCCCCGGATCCAGGTCAGACATTTCGTTGTCAGAACGATCTGGGACAGAGTCGTGGGCACGATTGTCCATTCCATCAGAGCGCATGCTGTCTTCAGAGAGGTTCCCATCTTCATCGTTTTCAGAGTCAGTGCTGTCATAAATCTGGTAGAACTTCTCTTGGAGTTGCCGGAGCTGCTTCTGCATGTCCTCCAGCTGTAGTTTGAGTTGCCGCCGTTCTTCATGTTTCTGTTCTTTGCGTGCAGAGACGAGCTGCTGAAAACTCTGCTGCTGCTGCTGTGGCAGTTTCTGTTTGCGCTTGTTTTCCCGGTAGTTCTCACGAGGACTCGGGGGTTGGGCTGCCCCCTCACGATCGTTATCTCCTGCACGAAGTGTGACGCTAGGAGAATGGCTCATCCCACGGATGATGTTCTCCACCCGGGCACGTTTGGCCCTTAGATGCTCATCTGTTAGCCTCTCCATC
TCAAATTGGG/- TCATGGAGGGCCTGCTGAATGGTGAAAGGCACTCCTGAGGGCTGCCCCGTGAGGAGTTGCTGCAAGCATCCTCCTGCTGCATCTCTGAGCCGGTACTCGAGAGGCCACTTCCCTGGAAATTAGGCTCACTGCCTCCATTTTTGGTCAAATTGTTTTTCAGAAGCTGAGATATGATGGTTGCCCCTGGAAAGGGCATCACAGCGTCTTCGTAAGAGTTTGCTCTCTTCAACAGCTTGCGAAGCACGTTGGACTTCTCACCGTCTGCGTGCTGCACCACTGAACACTCAACATCCTGCTCGGAACCGTGGGGATTCATGGCACTAAGAAAGGTTGCTTTTGCGCGGGTAAAAACCACAGATGCTTGCCCAACAGTCCTCTTCACTCCTATGTCAACTCTTCTTCTCTTGGTTTGTCTACTTAAGAGGGATGTGCTGTCATGGTCAGGCATCACTGGAACTGTTATTGTGCCATCTTCGAAAGCCTGTCAGCTGGGCACAGCT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations