Genomic Feature

hg13

ID
ZDB-ALT-130820-104
Name
hg13
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with zinc finger nuclease
Lab of Origin
Sood Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 20: 1387307 - 1387344 (GRCz11) (1) Details
Nucleotide change
GCTGGTATAATGCAGTGCTCACCGCTGCTCATCATCTG/TGCACCATTATGGCTCACCATCGCTGCT
Variant Notes
From submitter: Complex mutation in exon 2, cDNA: del95-132, ins 22bp;  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
28 bp inserted / 39 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GGTAGCGTATTATACTACTGTAGAAATATAATTGATTTATTATATTGATTTATTATTATTTACATGTGTAGCACATTGCTAGCTCTGCTTGAGTCACTAAAAGTAAAACTGCTTTGCAAATGTAGCATATGGGTCATTTAAAACCAGTTGTATTAAGTATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATAATATAATAATAATAACAAACAAGAGCACTCATATATGGCATGTTTAGCCCAGATTAAAATACACTTAGTCAAGTGGCTCAATGCATGCAGAGATAATGTAATATATAGTGCATCCTGCAACATATAATTTGCATCACATTAGAATAAAATTAGCATTAAATACTGGTCTCCGAGGGACTGATAAGTGTGTGTGTGTTTGTTGTGCAGGTGG
GCTGGTATAATGCAGTGCTCACCGCTGCTCATCATCTG/TGCACCATTATGGCTCACCATCGCTGCT CAGTATCCAGCAGACACTCTGGCTGTGCTGGTCATCAGCACTCCTGCCATGTTTGAGTGTGCATTCCTGCCCTTCTTACAGAGCCAGAGCTGCGAGAGCCTCAGAGACCCCATAGACCAGTGCACGGCACACACACTGTCTGCCTGCATCTCTCTGGTACAGTACTGCAATACTGTGTGTCCCACATAAATACCGCCTGTTATACAGCAACACAACTTGTCATACTGTAATACAGCAACACAACCTTTCATACCGCAATACAACCTAGGGTTGGGTGATGTTGACCAGTTTGGCATCGTACGATGTCTAATGTGAAACATCGCGATGGACGATGGCATCGTCGTCGTAGGGTGGGGGTGGTTGTTATTGTTAAATATCAATTAATTCATAATGAAATAATTAATTGTAGCCTACCGTTTTCACTACCTATGGTCTTTGCTTCTTTCATAACCAAACCATTAATAAGTAAAGTTACAAACAAATGACCACCTGTCAATCAC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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