Genomic Feature
pd1049
- ID
- ZDB-ALT-121210-2
- Name
- pd1049
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Bagnat Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| The cftr pd1049 mutation is a TALEN-produced indel producing a frameshift, ... | Navis et al., 2013 |
Variants
- Variant Type
- Delins
- Variant Location
- Chr 18: 20685227 - 20685233 (GRCz11) (1) Details
- Nucleotide change
- GGATATC/ATGTATATGTGTATTTTATAC
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 21 bp inserted / 7 bp deleted (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TTCCGGCTCTAATAATATTGAAGCGCAACAGAAAGGGTATTGAATCTTGATCTCCAAAAGTTTTCTAATTTAGGGCAAATCTAGAATGTGTGCATTAAAGTACCCCCAGCTGCCTGGCATCTATTACACAAAGAGCTAACACCAGGTTTATGGATGGAGTGTATTTAAATGAATCATGCAATGTGATTTATTTGCAATAGGCTTGTGTTAGCCAGCAGGCTGTCTGTGCAGATAATAAAATACACTAACCTTATTATAATCAGATTTGCTTGTTTCTGACTTGATTTGACATTATAAAAATAAGCTTCTGCATCTGTATTCTTAAATTTGTTCATTCATAGTAGATCACTTGCAGAACTTTCTGCTCCTTTTGGAGCTTTTATGCCCTATTAGTAAATTTGGGCCTAAATTTCAAATGATTTGCTTTTTAAAAGTGCTTAATGTCTCATACATTTCTTTTGTTTTTTTCCTACAGAGCCTGGGTATGGCCCATTTTATAT
GGATATC/ATGTATATGTGTATTTTATAC ACCACTGCAATGCATCCTGTGTACAGGGCTTATCTGGGAACTCATTGATGTCAATAGCTTCTGTGCACTTGCCGCCATCTCTTTACTGGGTGTTTTGCAGGCCTTCCTTTCACATAAAATGGGTCCTTACAAGTAAGTCTCATATTAGCCTACTGTGCATCCAAATACCAAAAAGTTAATCGTGTCTTACTCTAATAAACTTTGGCAGAGATTTTGCAGAAGTATTTTTATGCTCCCACAGAAACACGCGCATTCCAATTGTGATTCATCCCAAAAGCTTTGAAGAGTTTGGACAGGTAGTTCAGTGCTGCTCCTGTAATCAGGAGGCTGGATAGCCTTGTGCCTTTGAGAAATGTAAACAATGTTGGTCAGAACCGCCACCGAGACAGATTATCACAAGTGTAATTCCGAGTGGGCATTTAGTGTCTGTATTCAGTGTCAGTATAGGCATCATGCTTAGTCAGATGTATTAAACACCCACGTTGGAGTGTTTATGTCAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None