ZFIN Publication List

ZFIN ID: ZDB-ATB-090616-1

CITATIONS (37 total)

Antibody Name: Ab1-otof

Agarwala, S., Duquesne, S., Liu, K., Boehm, A., Grimm, L., Link, S., König, S., Eimer, S., Ronneberger, O., Lecaudey, V. (2015) Amotl2a interacts with the Hippo effector Yap1 and the Wnt/β-catenin effector Lef1 to control tissue size in zebrafish. eLIFE. 4:e08201

Ariza-Cosano, A., Bensimon-Brito, A., Gómez-Skarmeta, J.L., Bessa, J. (2015) sox21a directs lateral line patterning by modulating FGF signaling. Developmental Neurobiology. 75(1):80-92

Bricaud, O., and Collazo, A. (2011) Balancing cell numbers during organogenesis: Six1a differentially affects neurons and sensory hair cells in the inner ear. Developmental Biology. 357(1):191-201

Chatterjee, P., Padmanarayana, M., Abdullah, N., Holman, C.L., LaDu, J., Tanguay, R.L., Johnson, C.P. (2015) Otoferlin Deficiency In Zebrafish Results In Defects In Balance And Hearing: Rescue Of The Balance And Hearing Phenotype With Full-length And Truncated Forms Of Mouse Otoferlin. Molecular and cellular biology. 35(6):1043-54

Denans, N., Tran, N.T.T., Swall, M.E., Diaz, D.C., Blanck, J., Piotrowski, T. (2022) An anti-inflammatory activation sequence governs macrophage transcriptional dynamics during tissue injury in zebrafish. Nature communications. 13:5356

Ernest, S., Rosa, F.M. (2015) A genomic region encompassing a newly identified exon provides enhancing activity sufficient for normal myo7aa expression in zebrafish sensory hair cells. Developmental Neurobiology. 75(9):961-83

Faucherre, A., Pujol-Martí, J., Kawakami, K., and Lopez-Schier, H. (2009) Afferent neurons of the zebrafish lateral line are strict selectors of hair-cell orientation. PLoS One. 4(2):e4477

Fogerty, J., Stepanyan, R., Cianciolo, L.T., Tooke, B.P., Perkins, B.D. (2019) Genomic non-redundancy of the mir-183/96/182 cluster and its requirement for hair cell maintenance. Scientific Reports. 9:10302

Friedman, L.M., Dror, A.A., Mor, E., Tenne, T., Toren, G., Satoh, T., Biesemeier, D.J., Shomron, N., Fekete, D.M., Hornstein, E., and Avraham, K.B. (2009) MicroRNAs are essential for development and function of inner ear hair cells in vertebrates. Proceedings of the National Academy of Sciences of the United States of America. 106(19):7915-7920

Goodyear, R.J., Legan, P.K., Christiansen, J.R., Xia, B., Korchagina, J., Gale, J.E., Warchol, M.E., Corwin, J.T., and Richardson, G.P. (2010) Identification of the hair cell soma-1 Antigen, HCS-1, as Otoferlin. Journal of the Association for Research in Otolaryngology : JARO. 11:573–586

He, Y., Cai, C., Tang, D., Sun, S., Li, H. (2014) Effect of histone deacetylase inhibitors trichostatin A and valproic acid on hair cell regeneration in zebrafish lateral line neuromasts. Frontiers in Cellular Neuroscience. 8:382

Head, J.R., Gacioch, L., Pennisi, M., and Meyers, J.R. (2013) Activation of canonical Wnt/beta-catenin signaling stimulates proliferation in neuromasts in the zebrafish posterior lateral line. Developmental Dynamics : an official publication of the American Association of Anatomists. 242(7):832-46

Holmgren, M., Ravicz, M.E., Hancock, K.E., Strelkova, O., Kallogjeri, D., Indzhykulian, A.A., Warchol, M.E., Sheets, L. (2021) Mechanical overstimulation causes acute injury and synapse loss followed by fast recovery in lateral-line neuromasts of larval zebrafish. eLIFE. 10:

Jedrychowska, J., Gasanov, E.V., Korzh, V. (2020) Kcnb1 plays a role in development of the inner ear. Developmental Biology. 471:65-75

Jing, X., and Malicki, J. (2009) Zebrafish ale oko, an essential determinant of sensory neuron survival and the polarity of retinal radial glia, encodes the p50 subunit of dynactin. Development (Cambridge, England). 136(17):2955-2964

Laureano, A.S., Flaherty, K., Hinman, A.M., Jadali, A., Nakamura, T., Higashijima, S.I., Sabaawy, H.E., Kwan, K.Y. (2022) shox2 is required for vestibular statoacoustic neuron development. Biology Open. 11(12):

Lee, D.S., Schrader, A., Bell, E., Warchol, M.E., Sheets, L. (2022) Evaluation of Cisplatin-Induced Pathology in the Larval Zebrafish Lateral Line. International Journal of Molecular Sciences. 23(22):

Lee, S.G., Huang, M., Obholzer, N.D., Sun, S., Li, W., Petrillo, M., Dai, P., Zhou, Y., Cotanche, D.A., Megason, S.G., Li, H., Chen, Z.Y. (2016) Myc and Fgf Are Required for Zebrafish Neuromast Hair Cell Regeneration. PLoS One. 11:e0157768

Li, H., Kloosterman, W., and Fekete, D.M. (2010) MicroRNA-183 Family Members Regulate Sensorineural Fates in the Inner Ear. The Journal of neuroscience : the official journal of the Society for Neuroscience. 30(9):3254-3263

Li, H., Pei, W., Vergarajauregui, S., Zerfas, P.M., Raben, N., Burgess, S.M., Puertollano, R. (2017) Novel Degenerative and Developmental Defects in a Zebrafish Model of Mucolipidosis Type IV. Human molecular genetics. 26(14):2701-2718

Manchanda, A., Bonventre, J.A., Bugel, S.M., Chatterjee, P., Tanguay, R., Johnson, C.P. (2021) Truncation of the otoferlin transmembrane domain alters the development of hair cells and reduces membrane docking. Molecular biology of the cell. 32(14):1293-1305

Manchanda, A., Chatterjee, P., Bonventre, J.A., Haggard, D.E., Kindt, K.S., Tanguay, R.L., Johnson, C.P. (2019) Otoferlin Depletion Results in Abnormal Synaptic Ribbons and Altered Intracellular Calcium Levels in Zebrafish. Scientific Reports. 9:14273

Meritet, D.M., Spagnoli, S.T., Fischer, K.A., Löhr, C.V. (2019) Evaluating the Effects of Various Decalcification Protocols on Immunohistochemical Staining in Zebrafish (Danio rerio). Zebrafish. 16(3):280-290

Ogun, O., Zallocchi, M. (2014) Clarin-1 acts as a modulator of mechanotransduction activity and presynaptic ribbon assembly. The Journal of cell biology. 207(3):375-391

Parkinson, L., Stawicki, T.M. (2021) alms1 mutant zebrafish do not show hair cell phenotypes seen in other cilia mutants. PLoS One. 16:e0246844

Pei, W., Xu, L., Chen, Z., Slevin, C.C., Pettie, K.P., Wincovitch, S., NISC Comparative Sequencing Program, Burgess, S.M. (2020) A subset of SMN complex members have a specific role in tissue regeneration via ERBB pathway-mediated proliferation. NPJ Regenerative medicine. 5:6

Pei, W., Xu, L., Huang, S.C., Pettie, K., Idol, J., Rissone, A., Jimenez, E., Sinclair, J.W., Slevin, C., Varshney, G.K., Jones, M., Carrington, B., Bishop, K., Huang, H., Sood, R., Lin, S., Burgess, S.M. (2018) Guided genetic screen to identify genes essential in the regeneration of hair cells and other tissues. NPJ Regenerative medicine. 3:11

Pei, W., Xu, L., Varshney, G.K., Carrington, B., Bishop, K., Jones, M., Huang, S.C., Idol, J., Pretorius, P.R., Beirl, A., Schimmenti, L.A., Kindt, K.S., Sood, R., Burgess, S.M. (2016) Additive reductions in zebrafish PRPS1 activity result in a spectrum of deficiencies modeling several human PRPS1-associated diseases. Scientific Reports. 6:29946

Roberts, R., Elsner, J., Bagnall, M.W. (2017) Delayed Otolith Development Does Not Impair Vestibular Circuit Formation in Zebrafish. Journal of the Association for Research in Otolaryngology : JARO. 18(3):415-425

Rothschild, S.C., Lahvic, J., Francescatto, L., McLeod, J.J., Burgess, S.M., and Tombes, R.M. (2013) CaMK-II activation is essential for zebrafish inner ear development and acts through Delta-Notch signaling. Developmental Biology. 381(1):179-88

Sanchez, S.M.R., Fuson, O., Tarang, S., Goodman, L., Pyakurel, U., Liu, H., He, D.Z., Zallocchi, M. (2018) Quinoxaline protects zebrafish lateral line hair cells from cisplatin and aminoglycosides damage. Scientific Reports. 8:15119

Sheets, L. (2017) Excessive activation of ionotropic glutamate receptors induces apoptotic hair-cell death independent of afferent and efferent innervation. Scientific Reports. 7:41102

Thiessen, K.D., Grzegorski, S.J., Chin, Y., Higuchi, L., Wilkinson, C.J., Shavit, J.A., Kramer, K.L. (2019) Zebrafish otolith biomineralization requires polyketide synthase. Mechanisms of Development. 157:1-9

Vogl, C., Panou, I., Yamanbaeva, G., Wichmann, C., Mangosing, S.J., Vilardi, F., Indzhykulian, A.A., Pangršič, T., Santarelli, R., Rodriguez-Ballesteros, M., Weber, T., Jung, S., Cardenas, E., Wu, X., Wojcik, S.M., Kwan, K.Y., Del Castillo, I., Schwappach, B., Strenzke, N., Corey, D.P., Lin, S.Y., Moser, T. (2016) Tryptophan-rich basic protein (WRB) mediates insertion of the tail-anchored protein otoferlin and is required for hair cell exocytosis and hearing. The EMBO journal. 35(23):2536-2552

Warchol, M.E., Schrader, A., Sheets, L. (2021) Macrophages Respond Rapidly to Ototoxic Injury of Lateral Line Hair Cells but Are Not Required for Hair Cell Regeneration. Frontiers in Cellular Neuroscience. 14:613246

Zallocchi, M., Hati, S., Xu, Z., Hausman, W., Liu, H., He, D.Z., Zuo, J. (2021) Characterization of quinoxaline derivatives for protection against iatrogenic-induced hearing loss. JCI insight. 6(5):

Additional Citations (1):

ZFIN Staff (2008) Antibody information from supplier. Manually curated data.