ZFIN Publication List

ZFIN ID: ZDB-ATB-081008-6

CITATIONS (72 total)

Antibody Name: Ab1-col2a

Anderson, M.J., Pham, V.N., Vogel, A.M., Weinstein, B.M., and Roman, B.L. (2008) Loss of unc45a precipitates arteriovenous shunting in the aortic arches. Developmental Biology. 318(2):258-267

Askary, A., Mork, L., Paul, S., He, X., Izuhara, A.K., Gopalakrishnan, S., Ichida, J.K., McMahon, A.P., Dabizljevic, S., Dale, R., Mariani, F.V., Crump, J.G. (2015) Iroquois Proteins Promote Skeletal Joint Formation by Maintaining Chondrocytes in an Immature State. Developmental Cell. 35:358-65

Ates, K.M., Wang, T., Moreland, T., Veeranan-Karmegam, R., Ma, M., Jeter, C., Anand, P., Wenzel, W., Kim, H.G., Wolfe, L.A., Stephen, J.A., Adams, D.R., Markello, T., Tifft, C.J., Settlage, R., Gahl, W.A., Gonsalvez, G.B., Malicdan, M.C., Flanagan-Steet, H., Pan, Y.A. (2020) Deficiency in the endocytic adaptor proteins PHETA1/2 impair renal and craniofacial development. Disease models & mechanisms. 13(5):

Bammens, R., Mehta, N., Race, V., Foulquier, F., Jaeken, J., Tiemeyer, M., Steet, R., Matthijs, G., Flanagan-Steet, H. (2015) Abnormal Cartilage Development and Altered N-Glycosylation in Tmem165-Deficient Zebrafish Mirrors the Phenotypes Associated with TMEM165-CDG. Glycobiology. 25(6):669-82

Bensimon-Brito, A., Cardeira, J., Cancela, L., Huysseune, A., and Witten, E. (2012) Distinct patterns of notochord mineralization in zebrafish coincide with the localization of Osteocalcin isoform 1 during early vertebral centra formation. BMC Developmental Biology. 12(1):28

Bhadra, J., Iovine, M.K. (2015) Hsp47 mediates Cx43-dependent skeletal growth and patterning in the regenerating fin. Mechanisms of Development. 138 Pt 3:364-74

Braubach, O.R., Fine, A., and Croll, R.P. (2012) Distribution and functional organization of glomeruli in the olfactory bulbs of zebrafish (Danio rerio). The Journal of comparative neurology. 520(11):2317-2339

Brunt, L.H., Begg, K., Kague, E., Cross, S., Hammond, C.L. (2017) Wnt signalling controls the response to mechanical loading during Zebrafish joint development. Development (Cambridge, England). 144(15):2798-2809

Brunt, L.H., Norton, J.L., Bright, J.A., Rayfield, E.J., Hammond, C.L. (2015) Finite element modelling predicts changes in joint shape and cell behaviour due to loss of muscle strain in jaw development. Journal of biomechanics. 48(12):3112-22

Chaudhury, S., Okuda, K.S., Koltowska, K., Lagendijk, A.K., Paterson, S., Baillie, G.J., Simons, C., Smith, K.A., Hogan, B.M., Bower, N.I. (2020) Localised Collagen2a1 secretion supports lymphatic endothelial cell migration in the zebrafish embryo. Development (Cambridge, England). 147(18):

Chen, J.W., Galloway, J.L. (2014) The development of zebrafish tendon and ligament progenitors. Development (Cambridge, England). 141:2035-45

Clark, E.M., Link, B.A. (2021) Complementary and divergent functions of zebrafish Tango1 and Ctage5 in tissue development and homeostasis. Molecular biology of the cell. 32(5):391-401

Clément, A., Blanco-Sánchez, B., Peirce, J.L., Westerfield, M. (2018) Cog4 is required for protrusion and extension of the epithelium in the developing semicircular canals. Mechanisms of Development. 155:1-7

Clément, A., Wiweger, M., von der Hardt, S., Rusch, M.A., Selleck, S.B., Chien, C.B., and Roehl, H.H. (2008) Regulation of zebrafish skeletogenesis by ext2/dackel and papst1/pinscher. PLoS Genetics. 4(7):e1000136

Corallo, D., Schiavinato, A., Trapani, V., Moro, E., Argenton, F., and Bonaldo, P. (2013) Emilin3 is required for notochord sheath integrity and interacts with Scube2 to regulate notochord-derived Hedgehog signals. Development (Cambridge, England). 140(22):4594-4601

Culbertson, M.D., Lewis, Z.R., and Nechiporuk, A.V. (2011) Chondrogenic and Gliogenic Subpopulations of Neural Crest Play Distinct Roles during the Assembly of Epibranchial Ganglia. PLoS One. 6(9):e24443

Dewit, J., Witten, P. E., Willems, M., Huysseune, A. (2010) The distribution of fibronectin in developing zebrafish (Danio rerio) cartilage. Zeitschrift fur angewandte Ichthyologie = Journal of applied ichthyology. 26(2):205-209

Durán, I., Marí-Beffa, M., Santamaría, J.A., Becerra, J., and Santos-Ruiz, L. (2011) Actinotrichia collagens and their role in fin formation. Developmental Biology. 354(1):160-172

Elworthy, S., Hargrave, M., Knight, R., Mebus, K., and Ingham, P.W. (2008) Expression of multiple slow myosin heavy chain genes reveals a diversity of zebrafish slow twitch muscle fibres with differing requirements for Hedgehog and Prdm1 activity. Development (Cambridge, England). 135(12):2115-2126

Ferreira, C.R., Xia, Z.J., Clément, A., Parry, D.A., Davids, M., Taylan, F., Sharma, P., Turgeon, C.T., Blanco-Sánchez, B., Ng, B.G., Logan, C.V., Wolfe, L.A., Solomon, B.D., Cho, M.T., Douglas, G., Carvalho, D.R., Bratke, H., Haug, M.G., Phillips, J.B., Wegner, J., Tiemeyer, M., Aoki, K., Undiagnosed Diseases Network, Scottish Genome Partnership, Nordgren, A., Hammarsjö, A., Duker, A.L., Rohena, L., Hove, H.B., Ek, J., Adams, D., Tifft, C.J., Onyekweli, T., Weixel, T., Macnamara, E., Radtke, K., Powis, Z., Earl, D., Gabriel, M., Russi, A.H.S., Brick, L., Kozenko, M., Tham, E., Raymond, K.M., Phillips, J.A., Tiller, G.E., Wilson, W.G., Hamid, R., Malicdan, M.C.V., Nishimura, G., Grigelioniene, G., Jackson, A., Westerfield, M., Bober, M.B., Gahl, W.A., Freeze, H.H. (2018) A Recurrent De Novo Heterozygous COG4 Substitution Leads to Saul-Wilson Syndrome, Disrupted Vesicular Trafficking, and Altered Proteoglycan Glycosylation. American journal of human genetics. 103:553-567

Flanagan-Steet, H., Aarnio, M., Kwan, B., Guihard, P., Petrey, A., Haskins, M., Blanchard, F., Steet, R. (2016) Cathepsin-Mediated Alterations In TGFß-Related Signaling Underlie Disrupted Cartilage and Bone Maturation Associated With Impaired Lysosomal Targeting. Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research. 31(3):535-48

Flanagan-Steet, H., Sias, C., and Steet, R. (2009) Altered Chondrocyte Differentiation and Extracellular Matrix Homeostasis in a Zebrafish Model for Mucolipidosis II. The American journal of pathology. 175(5):2063-2075

Gayoso, J.A., Castro, A., Anadon, R., and Manso, M.J. (2011) Differential bulbar and extrabulbar projections of diverse olfactory receptor neuron populations in the adult zebrafish (Danio rerio). The Journal of comparative neurology. 519(2):247-276

Geng, F.S., Abbas, L., Baxendale, S., Holdsworth, C.J., Swanson, A.G., Slanchev, K., Hammerschmidt, M., Topczewski, J., and Whitfield, T.T. (2013) Semicircular canal morphogenesis in the zebrafish inner ear requires the function of gpr126 (lauscher), an adhesion class G protein-coupled receptor gene. Development (Cambridge, England). 40(21):4362-4374

Glasco, D.M., Wang, Z., Kang, S., Funkhouser, A.T. (2022) Acetaminophen Disrupts the Development of Pharyngeal Arch-Derived Cartilage and Muscle in Zebrafish. Journal of developmental biology. 10(3):

Hammond, C.L., and Schulte-Merker, S. (2009) Two populations of endochondral osteoblasts with differential sensitivity to Hedgehog signalling. Development (Cambridge, England). 136(23):3991-4000

Hammond, K.L., van Eeden, F.J., and Whitfield, T.T. (2010) Repression of Hedgehog signalling is required for the acquisition of dorsolateral cell fates in the zebrafish otic vesicle. Development (Cambridge, England). 137(8):1361-1371

Hatzold, J., Beleggia, F., Herzig, H., Altmüller, J., Nürnberg, P., Bloch, W., Wollnik, B., Hammerschmidt, M. (2016) Tumor suppression in basal keratinocytes via dual non-cell-autonomous functions of a Na,K-ATPase beta subunit. eLIFE. 5:e14277

Hawkins, M.B., Henke, K., Harris, M.P. (2021) Latent developmental potential to form limb-like skeletal structures in zebrafish. Cell. 184(4):899-911.e13

Hernández, L.P., Barresi, M.J.F., and Devoto, S.H. (2002) Functional morphology and developmental biology of zebrafish: reciprocal illumination from an unlikely couple. J. Int. Comp. Biol.. 42(2):222-231

Hodkovicova, N., Sehonova, P., Blahova, J., Faldyna, M., Marsalek, P., Mikula, P., Chloupek, P., Dobsikova, R., Vecerek, V., Vicenova, M., Vosmerova, P., Svobodova, Z. (2019) The effect of the antidepressant venlafaxine on gene expression of biotransformation enzymes in zebrafish (Danio rerio) embryos. Environmental science and pollution research international. 27(2):1686-1696

Hou, N., Yang, Y., Scott, I.C., Lou, X. (2017) The Sec domain protein Scfd1 facilitates trafficking of ECM components during chondrogenesis. Developmental Biology. 421(1):8-15

Huitema, L.F., Renn, J., Logister, I., Gray, J.K., Waltz, S.E., Flik, G., and Schulte-Merker, S. (2012) Macrophage-stimulating protein and calcium homeostasis in zebrafish. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 26(10):4092-4101

Iwasaki, M., Kawakami, K., Wada, H. (2022) Remodeling of the hyomandibular skeleton and facial nerve positioning during embryonic and postembryonic development of teleost fish. Developmental Biology. 489:134-145

Kague, E., Turci, F., Newman, E., Yang, Y., Brown, K.R., Aglan, M.S., Otaify, G.A., Temtamy, S.A., Ruiz-Perez, V.L., Cross, S., Royall, C.P., Witten, P.E., Hammond, C.L. (2021) 3D assessment of intervertebral disc degeneration in zebrafish identifies changes in bone density that prime disc disease. Bone research. 9:39

Knight, R.D., Mebus, K., d'Angelo, A., Yokoya, K., Heanue, T., and Roehl, H. (2011) Ret signalling integrates a craniofacial muscle module during development. Development (Cambridge, England). 138(10):2015-2024

Kuroda, J., Iwane, A.H., Kondo, S. (2018) Roles of basal keratinocytes in actinotrichia formation. Mechanisms of Development. 153:54-63

Lalonde, R.L., Akimenko, M.A. (2018) Effects of fin fold mesenchyme ablation on fin development in zebrafish. PLoS One. 13:e0192500

Lawrence, E.A., Kague, E., Aggleton, J.A., Harniman, R.L., Roddy, K.A., Hammond, C.L. (2018) The mechanical impact of col11a2 loss on joints; col11a2 mutant zebrafish show changes to joint development and function, which leads to early-onset osteoarthritis.. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 373(1759)

Le Corre, S., Eyre, D., Drummond, I.A. (2014) Modulation of the Secretory Pathway Rescues Zebrafish Polycystic Kidney Disease Pathology. Journal of the American Society of Nephrology : JASN. 25(8):1749-59

LeBert, D., Squirrell, J.M., Freisinger, C., Rindy, J., Golenberg, N., Frecentes, G., Gibson, A., Eliceiri, K.W., Huttenlocher, A. (2018) Damage-induced reactive oxygen species regulate vimentin and dynamic collagen-based projections to mediate wound repair.. eLIFE. 7:e30703

Li, L., Mao, A., Wang, P., Ning, G., Cao, Y., Wang, Q. (2018) Endodermal pouch-expressed dmrt2b is important for pharyngeal cartilage formation.. Biology Open. 7(12):

Li, L., Zhang, J., Akimenko, M.A. (2019) Inhibition of mmp13a during zebrafish fin regeneration disrupts fin growth, osteoblasts differentiation and Laminin organization. Developmental Dynamics : an official publication of the American Association of Anatomists. 249(2):187-198

Liedtke, D., Orth, M., Meissler, M., Geuer, S., Knaup, S., Köblitz, I., Klopocki, E. (2019) ECM alterations in Fndc3a (Fibronectin Domain Containing Protein 3A) deficient zebrafish cause temporal fin development and regeneration defects. Scientific Reports. 9:13383

Mangos, S., Lam, P.Y., Zhao, A., Liu, Y., Mudumana, S., Vasilyev, A., Liu, A., and Drummond, I.A. (2010) The ADPKD genes pkd1a/b and pkd2 regulate extracellular matrix formation. Disease models & mechanisms. 3(5-6):354-365

Marom, R., Burrage, L.C., Venditti, R., Clément, A., Blanco-Sánchez, B., Jain, M., Scott, D.A., Rosenfeld, J.A., Sutton, V.R., Shinawi, M., Mirzaa, G., DeVile, C., Roberts, R., Calder, A.D., Allgrove, J., Grafe, I., Lanza, D.G., Li, X., Joeng, K.S., Lee, Y.C., Song, I.W., Sliepka, J.M., Batkovskyte, D., Washington, M., Dawson, B.C., Jin, Z., Jiang, M.M., Chen, S., Chen, Y., Tran, A.A., Emrick, L.T., Murdock, D.R., Hanchard, N.A., Zapata, G.E., Mehta, N.R., Weis, M.A., Scott, A.A., Tremp, B.A., Phillips, J.B., Wegner, J., Taylor-Miller, T., Gibbs, R.A., Muzny, D.M., Jhangiani, S.N., Hicks, J., Stottmann, R.W., Dickinson, M.E., Seavitt, J.R., Heaney, J.D., Eyre, D.R., Undiagnosed Diseases Network, Westerfield, M., De Matteis, M.A., Lee, B. (2021) COPB2 loss of function causes a coatopathy with osteoporosis and developmental delay. American journal of human genetics. 108(9):1710-1724

Masselink, W., Cole, N.J., Fenyes, F., Berger, S., Sonntag, C., Wood, A., Nguyen, P.D., Cohen, N., Knopf, F., Weidinger, G., Hall, T.E., Currie, P.D. (2016) A somitic contribution to the apical ectodermal ridge is essential for fin formation. Nature. 535(7613):542-6

McDonald, G.L.K., Wang, M., Hammond, C.L., Bergen, D.J.M. (2021) Pharmacological Manipulation of Early Zebrafish Skeletal Development Shows an Important Role for Smad9 in Control of Skeletal Progenitor Populations. Biomolecules. 11(2):

McGowan, L.M., Kague, E., Vorster, A., Newham, E., Cross, S., Hammond, C.L. (2021) Wnt16 Elicits a Protective Effect Against Fractures and Supports Bone Repair in Zebrafish. JBMR plus. 5:e10461

Mitchell, R.E., Huitema, L.F., Skinner, R.H., Brunt, L.H., Severn, C., Schulte-Merker, S., and Hammond, C.L. (2013) New tools for studying osteoarthritis genetics in zebrafish. Osteoarthritis and Cartilage. 21(2):269-278

Moss, J.J., Wirth, M., Tooze, S.A., Lane, J.D., Hammond, C.L. (2021) Autophagy coordinates chondrocyte development and early joint formation in zebrafish. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 35:e22002

Narumi, R., Liu, S., Ikeda, N., Morita, O., Tasaki, J. (2020) Chemical-Induced Cleft Palate Is Caused and Rescued by Pharmacological Modulation of the Canonical Wnt Signaling Pathway in a Zebrafish Model. Frontiers in cell and developmental biology. 8:592967

Nichols, J.T., Pan, L., Moens, C.B., and Kimmel, C.B. (2013) barx1 represses joints and promotes cartilage in the craniofacial skeleton. Development (Cambridge, England). 140(13):2765-2775

Ning, G., Liu, X., Dai, M., Meng, A., and Wang, Q. (2013) MicroRNA-92a upholds Bmp signaling by targeting noggin3 during pharyngeal cartilage formation. Developmental Cell. 24(3):283-295

Niu, X., Subramanian, A., Hwang, T.H., Schilling, T.F., Galloway, J.L. (2020) Tendon Cell Regeneration Is Mediated by Attachment Site-Resident Progenitors and BMP Signaling. Current biology : CB. 30(17):3277-3292.e5

Paul, S., Schindler, S., Giovannone, D., de Millo Terrazzani, A., Mariani, F.V., Crump, J.G. (2016) Ihha induces hybrid cartilage-bone cells during zebrafish jawbone regeneration. Development (Cambridge, England). 143(12):2066-76

Plavicki, J.S., Baker, T.R., Burns, F.R., Xiong, K.M., Gooding, A.J., Hofsteen, P., Peterson, R.E., Heideman, W. (2014) Construction and characterization of a sox9b transgenic reporter line.. The International journal of developmental biology. 58(9):693-9

Ritter, D.J., Choudhary, D., Unlu, G., Knapik, E.W. (2023) Rgp1 contributes to craniofacial cartilage development and Rab8a-mediated collagen II secretion. Frontiers in endocrinology. 14:11204201120420

Santos-Ledo, A., Garcia-Macia, M., Campbell, P.D., Gronska, M., Marlow, F.L. (2017) Kinesin-1 promotes chondrocyte maintenance during skeletal morphogenesis. PLoS Genetics. 13:e1006918

Schneider, V.A., and Granato, M. (2006) The Myotomal diwanka (lh3) Glycosyltransferase and Type XVIII Collagen Are Critical for Motor Growth Cone Migration. Neuron. 50(5):683-695

Schnur, R.E., Yousaf, S., Liu, J., Chung, W.K., Rhodes, L., Marble, M., Zambrano, R.M., Sobreira, N., Jayakar, P., Pierpont, M.E., Schultz, M.J., Pichurin, P.N., Olson, R.J., Graham, G.E., Osmond, M., Contreras-García, G.A., Campo-Neira, K.A., Peñaloza-Mantilla, C.A., Flage, M., Kuppa, S., Navarro, K., Sacoto, M.J.G., Wentzensen, I.M., Scarano, M.I., Juusola, J., Prada, C.E., Hufnagel, R.B. (2021) UBA2 variants underlie a recognizable syndrome with variable aplasia cutis congenita and ectrodactyly. Genetics in medicine : official journal of the American College of Medical Genetics. 23(9):1624-1635

Schulz, A., Brendler, J., Blaschuk, O., Landgraf, K., Krueger, M., Ricken, A.M. (2019) Nonpathological Chondrogenic Features of Valve Interstitial Cells in Normal Adult Zebrafish. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society. 67(5):361-373

Shwartz, Y., Farkas, Z., Stern, T., Aszódi, A., and Zelzer, E. (2012) Muscle contraction controls skeletal morphogenesis through regulation of chondrocyte convergent extension. Developmental Biology. 370(1):154-163

Staab, K.L., and Hernandez, L.P. (2010) Development of the cypriniform protrusible jaw complex in Danio rerio: Constructional insights for evolution. Journal of morphology. 271(7):814-825

Tonelotto, V., Trapani, V., Bretaud, S., Heumüller, S.E., Wagener, R., Ruggiero, F., Bonaldo, P. (2019) Spatio-temporal expression and distribution of collagen VI during zebrafish development. Scientific Reports. 9:19851

Viña, E., Parisi, V., Cabo, R., Laurà, R., López-Velasco, S., López-Muñiz, A., García-Suárez, O., Germanà, A., and Vega, J.A. (2013) Acid-sensing ion channels (ASICs) in the taste buds of adult zebrafish. Neuroscience letters. 536:35-40

Wang, Z., Mizoguchi, T., Kuribara, T., Nakajima, M., Iwata, M., Sakamoto, Y., Nakamura, H., Murayama, T., Nemoto, T., Itoh, M. (2021) Py₃-FITC: a new fluorescent probe for live cell imaging of collagen-rich tissues and ionocytes. Open Biology. 11:200241

Westcot, S.E., Hatzold, J., Urban, M.D., Richetti, S.K., Skuster, K.J., Harm, R.M., Lopez Cervera, R., Umemoto, N., McNulty, M.S., Clark, K.J., Hammerschmidt, M., Ekker, S.C. (2015) Protein-Trap Insertional Mutagenesis Uncovers New Genes Involved in Zebrafish Skin Development, Including a Neuregulin 2a-Based ErbB Signaling Pathway Required during Median Fin Fold Morphogenesis. PLoS One. 10:e0130688

Wiweger, M.I., Avramut, C.M., de Andrea, C.E., Prins, F.A., Koster, A.J., Ravelli, R.B., and Hogendoorn, P.C. (2011) Cartilage ultrastructure in proteoglycan-deficient zebrafish mutants brings to light new candidate genes for human skeletal disorders. The Journal of pathology. 223(4):531-542

Yamamoto, M., Morita, R., Mizoguchi, T., Matsuo, H., Isoda, M., Ishitani, T., Chitnis, A.B., Matsumoto, K., Crump, J.G., Hozumi, K., Yonemura, S., Kawakami, K., and Itoh, M. (2010) Mib-Jag1-Notch signalling regulates patterning and structural roles of the notochord by controlling cell-fate decisions. Development (Cambridge, England). 137(15):2527-2537

Yang, S., Ning, G., Hou, Y., Cao, Y., Xu, J., Wu, J., Zhang, T., Wang, Q. (2022) Myoneurin regulates BMP signaling by competing with Ppm1a for Smad binding. iScience. 25:104495

Additional Citations (1):

ZFIN Staff (2002) Scientific Curation. Manually curated data.