Transcript

cacnb2a-207

ID

ZDB-TSCRIPT-110325-782

Name

cacnb2a-207

Previous Names

cacnb2a-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

cacnb2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000050651 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000050651|OTTDARG00000035580|ZDB-GENE-080808-7 cacnb2a|OTTDARP00000039771 cacnb2a-004 LG_ CU607104.20 Danio rerio protein_coding KNOWN, 2432 bp
TTACAGCTAAAATATTTACATTTACAGCACCATTTATCTA
GCTGTATTGTATCTATTTAACGTGTTGCATATCCTTACTG
TAAATTATACAGTAACTATACAGTAAAATACAGTTCATAT
TACAGTTAAATACTGTGTAATTAGCTAAAATTGTTAACAG
TGTATTATGTTTGGTTAGCTAGATTGTTGGCGGTTTTTTT
TGGTTGTTGCTAGAGTTTATTGAAGTTCGTGGTTGGTATG
GTGACTAGAGCAAACGCTCTAATCGGATTGGCTGATGAAG
GCCTCCTGGATACGACTGCTGAAACGAGCAACAGGAAACC
GAGTCAAGAACAACATTGGCGGTTCAGCAGACTCATACAC
CAGTCGGCCATCAGACTCGGATGTGTCTCTGGAGGAAGAT
AAAGAGACTTTACGCAGAGAAGCTGAGAGACAGGCTCAGG
CGCAACTCGACAAGGCCAAGAGTAAACCAGTGGCGTTTGC
AGTGCGCACTAATGTTGGCTACAGTGCTTCTTCTGAAGAT
GACGTCCCCGTGCCTGGAACGGGAATCTCATTTGATCCTA
AAGATTTCCTTCATGTTAAAGAAAAATTTAATAACGACTG
GTGGATCGGCCGCTTGGTGAAGGAAGGCTGCGACATCGGT
TTCATCCCAAGTCCAGTGAAGCTGGAAAGCAGTCGCCTTC
GCCAGGAGCAGCGCGCAAAACAAGGACGCTTTTACTCAAG
TAAATCAGGGGCAAACTCTTCATCCAGTTTAGGGGACATT
GTTTCAAACTCACGGAAATCAACTCCTCCCTCCTCAGCGG
ATCCCCTTCCAGCTGCAAACCAGTACTGGGAAACACCCAT
ACACACTCAATCACACACACTCATAGACTACGGCCAATTT
AGTTTCCTCAATTCCCTTATAGCGCATGTGTTTGTATGAT
TTGCAGTTCCTTGCAAGACTGTGTGTTTGTGATCGCTGGT
GATCGTGACACAGATCATGTGGTTGTTGGCCTGAACTACA
TGTCAGCTTTACACACATGCAACTGCCCTCGGACTATTTA
AACTGTGGACATTGACGCCGCAGGTTTAGATGCAGAGGAG
AGCGATCCTCCTCCCCATCAGCGATCTCCCAAAGCCAGCC
CAAACACAGTCATATCCCCTTTAGCCCGAGAGAAACGAAT
GCCTTTCTTTAAGAAGACGGAGCATGCTCCTCCATATGAT
GTGGTGCCGTCGATGAGGCCGGTTGTTCTCGTTGGACCTT
CACTCAAGGGCTACGAGGTAACAGATATGATGCAGAAAGC
GCTGTTTGACTTTCTGAAGCACCGGTTTGAGGGGAGGATA
ACCATCACAAGAGTGGCAGCTGATATCTCTCTGGCCAAAC
GCTCAGTACTGAACAACCCCAGTAAACACGCCATCATCGA
GCGCTCAAACACACGCTCCAATCTAGCGGAGGTTCAGAGC
GAGATCGAGAGGATATTTGAGCTGGCCCGAACGCTGCAGC
TGGTGGTTTTGGACGCCGACACAATAAACCATCCGTCACA
GCTGGGGAAAACCTGTCTGGCACCCATCATTGTCTACATC
AAGATCACCTCTCCAAAGGTTTTGCAGAGATTAATCAAGT
CCCGAGGAAAGTCTCAGGCCAAACATCTCAATGTACAGAT
GGTGGCAGCTGACAAACTGGCCCAGTGCCCTTCAGAGCTC
TTTGACATTATTCTAGATGAGAATCAGCTGGAAGACGCCT
GTGAGCACATGGCCGACTATCTGGAGCTATACTGGAAGTC
CACTCATCCTCCCAGTGGCGCTCCGTCCACTCCACTGCTG
GACAAACTGAGCGCAGTGACCGCAGCTGCAGTGGCCTGCA
AAGAGCAGCTGACCAACACACAACCCAAGGGCACCGGCAG
TGATGAGCATGCAGATCGAGCAGCGGCCAACAGGACTAGC
TTTTATGAAGACTATCATCACCATCATCATCCTCAACAGC
AACACTACCAGACACAGAAGCAAGAAAGCTTTGAAGAAGA
AGAGGAAGAAGAAGATGATGATGAAGAGAATACTGACCAA
AGACACGACAACAGAGACCAACAAAACCATCACAAAAACC
AGCACTCTTCATCCACACGGACCGAACGCCATCATCACCA
CCGCCACCACCACCATCATCATCATCACAGACACCATCAT
AGTCGCACCGCCAGAACACTGTCCAAACAGGAGACACTAG
AGTCCACTGAAACCCAGACACACTCGCAACCGCAGCAGGA
GGAGGAGCAGGAGTCTGTTCAACCCAACCATCATCGTCAT
CACCACCATCACCATCGTCATCATCACCGTAATGAGAAAG
AGAAGGAATACGATCACAACGAGAGGAACAGCCGGCAAAG
AGGAAAGCAGAAATCACAACGAGAACACCACCATCATCAC
GAGAGGAGAAAACATTATATAGAACAATGACA

Related Transcripts

Transcripts related to cacnb2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cacnb2a-203 (1) Ensembl	Havana	1929 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	cacnb2a-204 (1) Ensembl	Havana	2207 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	cacnb2a-207	Havana	2432 nt
aberrant processed transcript	cacnb2a-208 (1) Ensembl	Havana	2206 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-201 (1) Ensembl	Havana	1943 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-202 (1) Ensembl	Havana	1795 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-205 (1) Ensembl	Havana	1909 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-206 (1) Ensembl	Havana	4132 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations