Transcript

opa1-001

ID
ZDB-TSCRIPT-090929-7440
Name
opa1-001
Previous Names
None
Transcript Type
mRNA
Annotation Status
Withdrawn by Sanger
Annotation Method
Havana
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
None
RNA Central
None
Note
None
Sequence
OTTDART00000024617 (1) [ Show ] (double-click sequence to select) [Download]
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT 
>tpe|OTTDART00000024617|OTTDARG00000019883|ZDB-GENE-041114-7 opa1|OTTDARP00000020310 opa1-001 LG_ BX004839.9 Danio rerio protein_coding KNOWN, 4285 bp
CTAGCGATCGCCTGCTTGTGATGCCCTTGTTAGCCACGCA
GCTAACATATGTGTCCCATTTGGAAAGATGAATTGAATTT
TATACTGCAAAGAGATCCTAAACTCATCTATATTTGCCAT
TAGTTAATAATAGCAGGATGTTGCGAGCCGGAAGTGTAGT
TACCTGCATTGCCTGCAAGGGTTTGCTTCCCTCCAGGATG
GGGGTGAAGTTCAGAGTCCCATTGCAGAAACTGCACCCGC
TCTCCCGTGCCATCCATCACCGCTACTCTGCTAACAACAA
CCCACAGAGACCACCTCACTGCTCAGCTGCCCGGCATTAC
ACATCTCTCTCCAGGCTTCCCATGCGTCCTCCCAAATCAC
GCTCTGGAGGCCACGGCTATCAACAGCATCGGACCTTCTG
GGTGGCCCGTCTCGCCGCCAGACTGCTGAAACTGAGGTAC
ATCTTGCTTGGCTCAGCGGTTGGAGGTGGATACACTGCAA
AAAAGACCTATGATGAATGGAAGGAAATGCTCCCTGATAT
GAGTGAATACACATGGATTGTGCCAGACTTTGTTTGGGAG
CTGAGCGAAAATATAGATTTAGACAAGCTAGCCAGTGCTT
TACCTGAATTAGAAGAGATAGCCAAACTACTACCTGATAT
GGAGAAGATCGGAGAGAATTTCACCTTCCTGAAGAGCCTC
CTCTCCAGCGAAACTACTGGCGAATCGGCCCTAAGAGCAC
CAGACGTCCCACCAGCATCTGCAGCCATGGCTGACAGCGG
AGACAAGCAGTTCAAGAAGTCATCCGATAAAGAGAAAGTT
GACCAGCTTCAGGAGGAACTTCTTCGAACTCAGTTGAAGT
ACCAACGGATGCTTGAGCGCTTGGAAAAGGAAAATAAAGA
ATTGAGGAAAGTTGTATTGCAGAAGGATGACAAGGGTATT
CACCAAAGAAAAGTCAAGAAATCTTTGATTGATATGTACT
CTGAGGTCCTGGACATTCTTTCAGATTATGACTCCAACTA
CAACACTCAAGATCACCTGCCAAGGGTGGTGGTAGTTGGG
GACCAGAGTGCGGGAAAGACTAGTGTGCTGGAGATGATTG
CTCAAGCTAGGATCTTTCCGAGAGGCTCTGGAGAAATGAT
GACAAGGTCTCCTGTCAAGGTGACTTTGAGTGAAGGCCCT
CACCATGTAGCAATGTTTAAAGACAGCTCTCGGGAGTTTG
ACCTTGGCAAAGAGGAAGATCTTGCAGCACTGAGGCATGA
GATTGAGCTCAGGATGAGGAAGAGTGTGAAGGAAGGTCAG
ACAGTCAGCCCTGAGACCATCTCTTTAAGTGTTAAGGGCC
CTGGAATCCAGCGAATGGTGCTTGTAGATTTACCAGGGGT
CATCAGTACTGTGACAACTGGAATGGCCGCAGACACAAAG
GAAACCATTTTTAGCATTAGTAAAGCTTACATGCAGAATC
CAAACGCCATCATCCTCTGTATACAGGATGGCTCAGTAGA
TGCAGAGCGCAGTATAGTCACTGATCTGGTCAGTCAAATG
GACCCTCAGGGCAAAAGGACCATATTTGTTCTTACTAAGG
TTGATCTGGCAGAAAAGAACCTGGCTAGTCCAAGCAGAAT
CCAGCAAATAGTAGAAGGCAAATTATTCCCAATGAAGGCT
TTGGGCTACTTTGCTGTAGTAACTGGCAAAGGCAGCCCTA
ATGAGAGCATAGATTCCATTAAAGACTATGAGGAGGACTT
CTTCCAGAACTCAAGACTGCTGAAGGATGGCATGTTGAAA
GCTCATCAGGTGACTACAAAGAACCTGAGTCTTGCTGTGT
CAGACTGTTTCTGGAAAATGGTCAGAGAGTCAGTAGAGCA
ACAAGCAGATGCCTTTAAAGCTTCTCGATTTAACCTGGAG
ACTGAGTGGAAGAACAACTATCCTCGCTTACGAGAGCTGG
ACAGGAACGAGCTCTACGAGAAGGCCAAAAATGAGATCTT
GGATGAGGTGATCAGCTTGAGTCAAGTTACACCAAAACAC
TGGGAGTCTATCTTACAGAAGAAGCTTTGGGAAAGAGTCT
CGACACACGTCATAGAGAACATCTACCTGCCTGCTGCACA
GACCATGAACTCTGGAACTTTTAACACCACTGTAGACATC
AAACTCAAGCAATGGACTGATAAACAACTTCCTCATAAAG
CACTAGAGGTTGCTTGGGAGACTTTGCAGGAAGAGTTTGC
CCGCTTCATGGCCGAATACAAAGGGAAAGACCAGGATGAC
ATTTTTGACAAGCTGAAGGAAGCTGTCAAGGACGAGAGCA
TCAAACGACACAAGTGGAATGAAAGAGCCATGGACAGCTT
GAGAGTGATTCAACACAACGCTCTGGAGGATCGTTCAATC
ACAGACAAGCCCCAGTGGGATGCCGCTATACAGTTCATGG
AGGAAACGCTGCAGTCTCGTCTTAAAGACACTGAGTCAGT
AATAGCTGATATGGTGGGGCCAGACTGGAAGCAGAGGTGG
ATGAGCTGGAAAAACCGAACACCAGAGCAGCACACCCGGA
ATGAAACCAAAAATGAGCTGGAGCGTCTGCTGAAACTGCA
TGAGGATCACACAGCATATTTGGCCAATGATGAGGTCACT
ACAGTGCGCAAAAACCTGGAGGCCCGAGGGGTGGAGGTGG
ACCCTGTATTGATTAAGGACACATGGCATCAGCTCTTTCG
ACGTCACTTCCTACAGAAGGCACTACTACATTGCAACCTC
TGCAGACGAGGTTTCTACTACTATCAGAGGCACTTCGTAG
ACTCTGAGCTTGAGTGCAATGATGTGGTTCTGTTCTGGAG
GATTCAGAGGATGTTGGGCATCACTGCCAATACTCTTCGA
CAACAGCTCACTAACACTGAGGTACGGCGTTTGGAGAAGA
ACGTTAAAGAAGTATTAGAAGACTTTGGAGAGGACAATGA
GAAAAAAGTCCAGCTGATCACAGGCAGGAGGGTTCAACTG
GCAGAAGACCTCAAAAAAGTTCGCGAAATTCAGGAGAAAC
TTGAAGCCTTCATCGAAGCTCTTCACAAAGAGAAGTAGAG
CAGATCATCTTGTTTCTGGGCAGACAGACAGGCACACATG
CTCTTACACAAGAAAATGCACTGATCAAAAACCATCATTT
TTTCCTCTTTGCTCCTTTGCAAGGGACTTTCCTTTCAACT
TCTTCTGTTTTTAACAGCTCCTGTTGTATGTTCTCACAAA
ACACACACACAAACACACACACACTCTTCCCTCTTTAAAA
CAGTGAAAATAAGTGAACTAAGCTGGAGTCCCTTTACATT
TACTGCATAATTATTAATTTTGGACAAAAAGCACTTACTC
TGCAATCAGAATAATGGTACACATTGCAGTGCCATGCTTT
ATTCTTTCTTCACTCAAAGCTTCAAAAAACAATATTTGCA
CCAGAGAAACCATTCAGACAGGCACACACAACCATAATCT
CTCATCCCCTGTTCCCAATAAATGACTTGCTCCAGGTCTC
TCTTTCCCCTGACTTTCTTTATTATTTAAGGTAACATTTA
TGGATAAGTGCTAAATGCTAAAACGCATCTTTACTGATTG
GCCTTGATAGAGAAATTGTTCTAAAATGTTTTCTCACCAG
AAGCTGCGATTTCATATCTCATTGCCATCACAAGTCACAG
ATCTTTTTGTTTTCCTTCACCTAAAAATTATTTTTTGTAA
TTATGTAGAATCTTCTATTAATATATGAAGATGTTTAATA
CCGTTTTTGCTATTTGTAGTCCCATTTAGCTCAGTTTATT
ATGTTTAATAAACTGTGATTGGCTTGATCTTGAAGATGCA
AAGTTATGGATACATTAACCGCATTATATCATCTGCTGGA
TGAAAACTTGTTCAATACTTTTGTTCTTAACATCATTTTC
ATTTAATTTCTTTTGCTACTTTGAATGGTTCTTATTTTTC
ATCTGCCATCTTCAACTATAGTGCACTTTTATTTTTTGCT
TGCACATTTTATATCTCGCTCCCTGGATTTAATATGAAAT
CCACTTTAATATCCTGATAATTTCGAGTGTAAGAGATGCC
ACAACTCAATGTAAATGGTAAATATATTTGTAAAGTCTCC
GTAGAGTAAGTTCATTCAAATGATGAATCTGTTGTCACAA
GGGGAAATATATGAGTGTGGTGCTTGTAGCAAAGTAGATG
TCGGTTCATTTAAGAATGCTTCCCCTATTTGCTGTAGATT
GTAATGTTTGCATGTTGTATCCCATCCGATGTGGTTTATT
TATTAAATTGGTGTTAAAGAAAAGAAGAATAAAAGTGACT
TTAAA
Related Transcripts
Transcripts related to opa1
Type Name Annotation Method Length (nt) Analysis
mRNA opa1-201 (1)
Ensembl
Havana 4305 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA opa1-202 (1)
Ensembl
Havana 1463 nt
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations
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