Transcript

cspg5b-202

ID

ZDB-TSCRIPT-090929-4496

Name

cspg5b-202

Previous Names

cspg5b-002
si:dkeyp-114f9.4-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

cspg5b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000019550 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000019550|OTTDARG00000015177|ZDB-GENE-060503-368 cspg5b|OTTDARP00000042249 cspg5b-002 LG_ CR626877.10 Danio rerio protein_coding KNOWN, 1627 bp
GTGCGACCGAGATACCGCAGTCCATGGTGTTGTGCAAATA
GTACCGAATCTCTCCGCTTCTAAGCGGACTCTTAATACTG
ACTACAAATAAGACACATGTAACCGTCTTAGCATCTTCTT
GAAGTTGGATAAGAGATGACGGATCCCTAGCGACGCATAA
GGTGGTCTGAATCTCGACCAAAGAGGAATAACATCTGAAG
ACAACATCCGAAGTTGGCAGGACACCGCGCGCTTCGTTAC
GCCTTCGATTTTTAGGAGATATCTGTTCAGGATTATTGCC
TAGATTCTTCTCAATATCTGCCGTATGACTTTACCTTTAA
CAGAAGATTGAGCTGGTTTAGTTTAAGTGTTTTTAAAGAC
AGTTAGTGTCATGATGAACTCTAGGCGCACGTTGTTTTCA
GCAGGTTGGGAGTCGATGGTGCTGTCCAGCGTCCTGCTTC
TTCACATTATTGCGCTGTGTGTGAATGGTGCAACATTCAG
GAGTATATCTGGAACAAGGGCTCCAGGTGTGAATCAGTCA
TTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGC
CGCCATCATGTTGCTTCTCCTCTTCATGGTTATAGTGTTT
TTCTCCAAGAGGCTGCATGTGCTTAAGACTGAAAACAGAC
GCCTTCGCAAGCACAGTAAGTACCGTCCAAAGTCGGAGCA
GCACATTGATAACTTCTCGCTGTCCACTGTTGCAGAGGGC
TCTCAGGCAAACGATGACACAAGCAAAGAAGAGCCATGCA
AATGTCCCCCTAAAGAGGACGAGTCTTTGAACAACCAGAA
CTCAGTCACGCCAAAACTGGAAAACGACAAGCCTGCCACA
GAGGACAATGCAGAGGAGGTAAACTCACCGCAGAACAATG
TGAACAACGTGTAGTAACACTTCATTGCCACACACTGGTG
CTGTGACTGACACACTCAAAGTTACTAAATTGGCTTAATT
AGTGGATTAATAATTGACATGGCACTCTTTCAGCCTCAAA
ATACACAAAGGAAACCCTGAACTAGCATGCTAGCGTATGT
TTGTGTGCTGTCACCATATGGTGGATTTCCAATTGCCAGA
CATTCACCTTGTCCTTGCTTGCTGTCACTGCTGATGTCAT
GCTGCACTGTGTTATGTCAACGCTTTGTTATGCTACGTCA
CGCTACACTATGACACTCTACACCCCTCAAAGCAAAGGTT
TAGCCATCAGGTTTTTAACCTTTGACCTTCAGTCCTCACC
GCTGTGACACCTTCACTATCTGAACTCCTGTCTGTCCTGC
CTTACTCTAGTCAGCATGCATTGGTGGTCTTTCGTAATAA
AGAAACTGTCTGTGGGAAATTATATAGCTAGACAGTGTCC
TAAAATTGACATTTGTAGATGTTTCTTGACTTCTTCAGTG
AGTAGGTCTGAATATATACTTACAAATACTGCTTGGATTG
GTATTTACATGCAGTATGATACTGTTTCGATGCGCAATGT
GTCTTGAAACTAACTGATTCGGATTATTTTGATGTACTGA
TTTTTTTTGTACTTTGCAATGTTTTTTTTTTTTTTTTTTG
TGAAAATTGAGAAATGAGAATAAATAAAGCCAGTTTGTTT
GGAATAAAAACAAATTGTACAATTACA

Related Transcripts

Transcripts related to cspg5b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cspg5b-202	Havana	1627 nt
mRNA	cspg5b-201 (1) Ensembl	Havana	1907 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cspg5b-203 (1) Ensembl	Havana	2485 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations