Transcript

sh2d5-201

ID

ZDB-TSCRIPT-090929-11557

Name

sh2d5-201

Previous Names

sh2d5-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

sh2d5 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000029131 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000029131|OTTDARG00000022588|ZDB-GENE-050327-67 sh2d5|OTTDARP00000038123 sh2d5-002 LG_ BX005282.24 Danio rerio protein_coding KNOWN, 2027 bp
GCGGGATTTAGGGGATTAAGGTGAGTCAGGATTGCAAAAC
CCTCAGCGGATAGTCGACCCACCCTGCCAGATTCAGTCGC
GTGGATTAATGTTTTAGAAAAGGCAAACACCACAACCAGG
TTCAGTTTGGAACATGGGTGAAACAGCTGGAAGAGAGCAT
GGGACTGTTACAAGATCAGCTGAGTACATTGGCTCGTTTC
CTGTGGATGACAGTTGTTTGGATGATCAGATTCAACAGCT
GCACACTCAGCTGAAGTCTCTCAAGAACTGCAAGAGCAAG
CGAACCGTGTCTTTGAGATTTTCTGTCAAAGGAGTCAAAG
TTTATGATGAAGATGAGACGACGCTGCTCATGGCTCATGC
GATGTGTCGAGTCTCCCTGTCCACCGCCCGTCCCTCTGAT
GCCCAGTTTGCCTTTGCCTCTCATAATCCTGGAAATTCTG
ATGCCCAGCTCTATTGCCACCTCTTCAGAGCCAGACATGC
CCGTGCTGCCCAGTTCCTAAACCTGCTTCTTTGCCGCTGT
TTTCAACTGTATTTTCTGGAGAAGCACCCAGAGGAAGCTC
AGGAGGAGTGTTCGGGGAAGAAGCCGAGTCGAGCTCCATC
GTTGCTGAACCAAGGGTTTCCCCTCAGTGTGAGCGCCTTG
GTTTCTTTCCGCAGGGCCCCAACTCAAGGTCTGCTGCCAG
GAGCTAAGTTGTTTTCACAGCAGAGCACCGAGCAAGTGAG
CAGTCCTGAAGAGGGCCCTACTTCCTCTCCAACTATAGTT
CGTAAAATGGCGATCCGGACCAAAGAGCTGCGCTCTGGAG
CTTATCGCTCTTTTACATTTACCCCCCTCAAACAGCGTCA
TCTGCAGGACAAACTGAGTGCACCACAAGGTGGGATGAGT
GTTCATAGAACACTTTCGAGACTGAAAGAGTTCCTTAGAA
AAGGAACAAGCCACTGCAAAGGCATGCATGTCTCGAGCTC
CCAGTTTGGCCGAAACAGAAGAAGCACTGGCTCAAGCTGT
GTGGTGTTGGGCTGGCGTGTCTAGTGACTGTAGCTCCTCA
CTGCTGGCAGATGATGTTTTGGGTGCTTTCCTTCTCTGTC
CTCATCCCAAAAAGCCCAATCGTGGATCTCTTATAGTTCG
TTTTTCCTCTGGACTGGTAACTTATGCTATTAAGAATTCC
AAAGGGAAGTTCCGGCTTGAGAAGTGCCACACTGACTTTG
AAAGCCTTGCTGCTTTAATGGAGCACTACACAGAGTTCGG
TGACGAGCTGGAATGTTCTCTGAGCTGCGCACGCGTCAAC
CACTGTTACGACTGGGAGGAGATGGTGAATAAGGGTTCAC
GTTTACTGCAGGACAACAAAAAAGGCACTTTTAAATGCCG
AAGTTGGGTTTGAATCATGTATTTCTTTTTAGATCTCATT
TTTATGCTATATTTTACTTAGTTTTAGGTATTTGTGGAGC
TGTTGATTTTAATAAGCTTCCCAAACAACAGTATCTCAGG
TCACTGGCACAGTTTTTGATATATATACTTTATTTTTTTT
TTAATGAACACATTTGTTTTTGCCTGTTGGCAGTAACCTC
AACCCAACCTCTAAAACACTCACTTTATTGGTGTGTTTTT
CTTTTTTTCTTAGGTTTTTTTTTTGGTTGAAAGTTCTTTT
ATAGGGAAACAAGCACTTATGTTTTTCATGTCAGTGTCAG
ATTTAAATGTGTACTCAACATTTGTATAGAGTGCATACTG
TATATATTTGTTTTACTAACGCTGTATTATGTCTTTAAAA
TCATGTTTTTGTATGTTGATCTTACATCAGGCTCTTTTTC
TCTCTTGTTTTTATGATGGCAATAGTTTAAGAGAGAATAT
TTAGTGATAACTTCAAACCCCAAATTGTCTATCACAAATT
TATTAACAGTTTTTTTTTTCTTGTACTAATTAATATTTTT
GTATCTCTTGCACATTGCACCTCTCAAATACACACAGTTT
CTATTGTTAGCTTTGCACCAATGTAAATGAAGTGATTTGC
CTCCTTTACATAAACTGATTTTACACT

Related Transcripts

Transcripts related to sh2d5

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sh2d5-201	Havana	2027 nt
mRNA	sh2d5-202 (1) Ensembl	Havana	1979 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	sh2d5-204 (1) Ensembl	Havana	530 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sh2d5-003 (1) Ensembl	Havana	923 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sh2d5-004 (1) Ensembl	Havana	308 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	sh2d5-006 (1) Ensembl	Havana	792 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations